Raphanus sativus (radish): 108854852
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Entry
108854852 CDS
T06014
Name
(RefSeq) phenylalanine ammonia-lyase 2
KO
K10775
phenylalanine ammonia-lyase [EC:
4.3.1.24
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00360
Phenylalanine metabolism
rsz00940
Phenylpropanoid biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Module
rsz_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
rsz_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
108854852
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
108854852
Enzymes [BR:
rsz01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.24 phenylalanine ammonia-lyase
108854852
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Gene cluster
GFIT
Motif
Pfam:
Lyase_aromatic
Motif
Other DBs
NCBI-GeneID:
108854852
NCBI-ProteinID:
XP_018484019
UniProt:
A0A6J0NHL0
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Position
4:complement(47203668..47206459)
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AA seq
724 aa
AA seq
DB search
MDQINVSVHQNGKTEAMLLCGGVEKTKVIVAADPLNWGAAAEQMKGSHLDEVKRMVEEYR
RPVVNLGGETLTIGQVAAISNVGGGVKVELAEASRAGVKASSDWVMESMGKGTDSYGVTT
GFGATSHRRTKNGTALQTELIRFLNAGIFGNTKETCHTLPESATRAAMLVRVNTLLQGYS
GIRFEILEAITSLLNHNISPSLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPDGESL
TAEEAFKKAGIASGFFDLQPKEGLALVNGTAVGSGMASMVLFEANVQSVLAEVLSAIFAE
VMSGKPEFTDHLTHRLKHHPGQIEAAAIMEHILDGSSYMKLAQKLHEMDPLQKPKQDRYA
LRTSPQWLGPQIEVIRHATKSIEREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNT
RLAIAAIGKLMFAQFSELVNDFYNNGLPSNLTASNNPSLDYGFKGAEIAMASYCSELQYL
ANPVTSHVQSAEQHNQDVNSLGLISSRKTSEAVDILKLMSTTFLVAICQAVDLRHLEENL
RQTVKNTVSQVAKKVLTTGVNGELHPSRFCEKDLLKVVDREQVFTYVDDPCSATYPLMQK
LRQVIVDHALSNGESEKNAVSSIFQKIGAFEEELKVVLPKEVEATREAYGNGTAVIPNRI
KECRSYPLYKFVREELGTKLLTGEKVVSPGEEFDKVFTAMCEGKIIDPLMDCLKEWNGAP
IPIC
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatcaacgtatcagttcaccaaaacggcaaaaccgaagcgatgttgttgtgc
ggcggagtagagaagactaaagtgattgtggcggcggatccgttgaattggggtgctgcg
gcggagcagatgaaagggagtcatttggatgaggtgaagaggatggttgaggagtaccgt
agaccggtggtgaatctcgggggagaaacgctcacgatcggacaagtcgcggcgatctcg
aacgtaggcggtggagtgaaggtcgagctagcggaggcttcgagagctggcgtgaaagct
agcagcgattgggttatggagagtatgggtaaaggtactgacagttacggtgtaaccacc
gggtttggagctacttctcaccggagaaccaaaaacggtaccgcattgcaaaccgaactc
atcaggtttttgaacgccggaatcttcgggaacacgaaggagacatgccacacgctaccg
gaatccgccacgagagccgccatgctcgtccgagtcaacacactcctccaaggatactcc
gggatccgattcgaaatcctcgaagcgatcaccagcctcctcaaccacaacatatctccg
tctctccccctccgcggaaccataaccgcctccggcgatctcgtccccctctcctacatc
gccggcctcctcaccggccgtccgaactccaaagccaccggtcccgacggcgaatcccta
accgccgaagaagccttcaagaaagccggaatcgcatccggattcttcgatctacagcct
aaggaaggcttagcgctcgtcaacggcacggcggttggatccggcatggcgtcgatggtt
ctcttcgaagcgaacgttcaatcggtcctcgccgaggttttatcggcgatcttcgcggag
gtgatgagcgggaagccggagttcaccgatcatttgactcaccgactcaaacaccacccc
ggacaaatcgaagcggcggcgatcatggagcacatcctcgacgggagctcgtacatgaag
ttagcgcagaagcttcacgagatggatccgttgcagaaaccgaaacaagaccgttacgcg
ctccgcacgtctcctcagtggctaggccctcagatcgaagtgatccgtcacgccaccaag
tcgatcgagcgtgagatcaactccgttaacgacaatccgttaatcgacgtttcgaggaac
aaagcgattcacggcggtaacttccaggggactcctataggtgtctctatggacaacacg
cgtttagcgattgcagctatcgggaagctcatgttcgctcagttctccgagcttgttaac
gacttttacaataacggtcttccgtcgaatttaaccgcttccaacaacccgagcttggat
tacggattcaaaggagctgagatcgccatggcttcttactgctctgagcttcagtaccta
gccaatccggttacgagccatgttcagtcagctgagcagcataaccaagatgttaactct
ttaggactcatttcgtctcgtaaaacgtctgaagctgttgacattctcaagctgatgtcc
acaacgttcctcgtcgctatatgtcaagctgttgatttgcgacatcttgaggagaatctg
agacagactgtgaagaatactgtttctcaagtggcgaagaaagtgttgaccactggagtc
aacggggagttgcatccatcaaggttctgtgagaaagacttgcttaaggtcgttgatcgt
gaacaggtgtttacgtatgttgacgatccttgtagcgctacttacccattgatgcagaag
ttaagacaagttattgttgatcacgctttatccaatggggagagtgagaagaacgcagtg
agttcgatctttcaaaagattggagcttttgaggaggagctcaaggtggttcttcctaaa
gaagttgaggcgactagagaggcttacggtaacggaacagctgtgattccgaacaggatt
aaggaatgtcggtcttatccattgtataagtttgtgagggaggagctcggaacgaagttg
ttgaccggagaaaaggttgtgtctccgggagaggagtttgataaggtgttcactgcaatg
tgtgaaggtaagattattgatccactgatggattgtctcaaggaatggaacggagctccc
attcccatatgctaa
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