Raphanus sativus (radish): 108862716
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Entry
108862716 CDS
T06014
Name
(RefSeq) long chain base biosynthesis protein 2b isoform X4
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00600
Sphingolipid metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108862716
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108862716
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
108862716
Amino acid related enzymes [BR:
rsz01007
]
Aminotransferase (transaminase)
Class II
108862716
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
108862716
NCBI-ProteinID:
XP_018492444
UniProt:
A0A6J0P6T1
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Position
5:complement(34254927..34259987)
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AA seq
484 aa
AA seq
DB search
MYFTTISTYVSCCLISGFGHLRDFFSRILLLPFTNDNLQGYAPICLEYEDFYMRRAYHRV
QDCFARPIASAPDAWVDVLEINWKYQEKVLDRTTKSRRCLNLGSYNYLGFGSFDEYCTPR
VIESLKKFSASTCSSRVDAGTTSVHVELEECVAKYVGKHSAIVFGMGYATNSFIIPVLIG
KGGLIISDSLNHSSIINGARGSGANIRIFQHNTPSHLEKILREEIAKRQTKTHKPWTKII
VIVEGIYSMEGEICKLPEIVSICKKYKAYVYLDEAHSIGAIGGTGRGVCELLGVDTADVD
IMMGTFSKSFGSCGGYIAGSKELIQYLKHHCPSHLYATSISTPSAQQIISAIQVILGDDG
SNRGAQKLARIRENSNYFRTELRNMGFKVLGDEDSPVMPIMLYNPAKIPAFSRECLRENV
AIAVVGFPATPLMLGRARICISASHSKPDLIKALEVISKVGDLTGIKYFPAAPEKQEKNG
IKLV
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtactttactactatttcaacatatgtgagctgctgcttgatcagcggctttggccat
ctacgtgattttttcagtcgcatcctccttttgccattcaccaacgacaatctccagggt
tatgcgccaatctgcttggaatacgaggatttctacatgagacgagcgtatcatcgggtt
caggactgttttgcccgtccaatagcgagtgcaccagatgcatgggttgatgtgctcgag
ataaactggaaatatcaggaaaaggtgctagatcgaacaacaaagagcagaaggtgcctt
aatttgggatcttacaattatcttggatttggttcattcgatgaatattgcacgcctcgt
gttattgagtccttaaagaaattttcagcaagtacatgtagttctcgtgttgatgcagga
actactagtgtgcatgtagagcttgaggaatgtgtagctaaatatgtgggaaaacattct
gctattgtctttggcatgggatacgccacaaactcgtttattatacctgttttgattgga
aagggaggattgataataagtgattctttgaaccatagttcgattattaatggtgctcga
ggttctggagccaatattcgcattttccaacataacacaccttctcacttggaaaaaata
ctgagagaagaaatagccaaaagacaaaccaaaacacacaaaccctggacgaaaatcatc
gtcatcgttgaaggtatttacagtatggaaggggagatttgcaagctgcccgagattgtg
tcgatatgcaagaagtacaaggcatatgtttatttggatgaagctcatagcattggagcc
ataggaggtacaggaagaggtgtttgtgaacttcttggagttgatacggctgatgtggac
ataatgatgggaaccttcagtaaatcttttgggtcttgtggtggatatattgccggctct
aaggagctcatccaatatttgaagcaccattgcccgtctcatctttacgcaacatcaatt
tcaactccttccgcgcaacaaatcatatcggccatacaagtcatccttggagacgacggt
tccaacagaggggcacaaaagctagcaagaatacgagagaatagcaattattttcggact
gagctaaggaatatgggattcaaggtacttggagacgaggattctccagtcatgccaata
atgctttacaatccagctaaaatccctgccttctctagggaatgcttgcgagaaaatgtt
gcaatcgccgtggtcggtttcccggctacacctctaatgctaggaagggctcgtatttgc
atatccgcatctcattccaaaccagatcttattaaagccttagaggttataagcaaagta
ggtgaccttaccggaatcaaatattttcctgcagcgccagagaagcaagaaaaaaatggc
atcaaattagtttag
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