Raphanus sativus (radish): 108863296
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Entry
108863296 CDS
T06014
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108863296
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108863296
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108863296
03036 Chromosome and associated proteins [BR:
rsz03036
]
108863296
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108863296
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108863296
Chromosome and associated proteins [BR:
rsz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108863296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ComGF
Motif
Other DBs
NCBI-GeneID:
108863296
NCBI-ProteinID:
XP_018493176
UniProt:
A0A6J0P918
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Position
5:29624758..29628492
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AA seq
497 aa
AA seq
DB search
MNGDDDDEVVAASAVDTSLPLEWRFSQVFGERSAGEEVQEVDVISAIEFDHSGDHLATGD
RGGRVVLFERSPVTNSSGGDRRDVEETDYPPLRHPEFRYKTEFQSHDPEFDYLKSLEIEE
KINKIRWCQTANGALFLLSTNDKTIKYWKVQDKKIKKICQVNSDPPGNASSSSITTACLG
NGGGVPEAISSLRLPVVTSHESSPVARCRRVYSHAHDYHINSISNNSDGETFISADDLRI
NLWNLEISNQSFNIVDVKPEKMEDLSEVITAAEFHPTHCNMLAYSSSKGSIRLLDLRQSA
LCDSHSKLFEEPEAAGPKSFFTEIIASVSDIKFAREGRYLLSRDYMTLKLWDINMDSGPV
STFQVHEYLKPKLCDLYENDSIFDKFECCISGNGLRAATGSYSNLFRVFGVSPGSTETAT
LEATRNPMRRHVPVPSKPSRLGGIARVVGRAGTESPAVDGSSSNALDYKTKLLHLAWHPS
ENSIACAAGNSLYMYYA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtgacgatgatgatgaggtcgtcgcagcttcggcagtagacacatctctacct
cttgaatggagattctcccaggtcttcggtgaacgcagcgctggtgaagaagttcaagaa
gttgatgtgatatcagcaatcgagtttgatcattcgggagaccatcttgcaactggtgac
cgtggaggacgcgttgttctttttgagagaagccctgtcacaaatagcagtggaggagat
agaagggatgttgaagaaacagattatcctccactgaggcacccggagttccgttataaa
actgagtttcagagtcatgaccctgagtttgattatcttaagagtttggagatagaggag
aagatcaacaaaattagatggtgtcaaaccgccaatggcgctctttttctcctttccact
aacgataaaactatcaagtactggaaggttcaagacaagaagatcaagaaaatttgtcaa
gtaaattcagatcctccaggaaatgcaagctcctctagcattacaaccgcgtgccttggg
aacggaggaggagtacctgaagccatctcttcgctccggttgccagtggtaactagccat
gagtctagccctgtggcaagatgtcgaagagtctattctcatgctcatgattatcatatc
aattccatctcaaataacagtgacggcgaaacatttatttctgctgatgatttgcgaata
aatctttggaatctggagataagcaatcaaagcttcaatattgttgatgtcaagcctgag
aaaatggaagatctatctgaggttatcacagcagcagaatttcatcctacgcattgcaat
atgttagcttatagcagttcgaaaggctcaattcgcctgcttgatctgcgccaatcagct
ttatgtgattcacattccaaattgtttgaggaaccagaggcagcaggtcctaagtccttc
ttcactgagataattgcttcagtttcagacattaaatttgccagagaaggaagatatctc
cttagccgtgactacatgacacttaagttatgggacatcaacatggattcaggtccggta
tcaactttccaggttcatgagtatctgaaacccaagctctgtgatttatatgaaaacgat
tccatctttgacaagttcgagtgttgtataagtgggaatggattgcgagcagctacaggt
tcttacagcaatctgttccgtgtgtttggtgtctccccgggaagtactgagactgcaacc
ttagaagcaaccagaaatcctatgaggagacatgtcccagttccctcgaagccatccaga
ctaggcggtatagcgcgtgttgtaggtagagcaggaacagagagtcctgcagtcgatggg
agcagtagcaatgctcttgattacaaaacaaagttgctgcatcttgcttggcatccaagt
gagaactcaattgcttgtgccgctggaaatagcttgtacatgtactatgcttag
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