Raphanus sativus (radish): 108863459
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Entry
108863459 CDS
T06014
Name
(RefSeq) long chain base biosynthesis protein 2b
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00600
Sphingolipid metabolism
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108863459
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rsz01007
]
108863459
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
108863459
Amino acid related enzymes [BR:
rsz01007
]
Aminotransferase (transaminase)
Class II
108863459
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
108863459
NCBI-ProteinID:
XP_018493396
UniProt:
A0A6J0P9P1
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All DBs
Position
5:complement(34259959..34262940)
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AA seq
489 aa
AA seq
DB search
MITIPYLTAVSTYFSYGLLFAFGQLRDYTRLIFDWCSTNNLHGYAPICLAHEDFYIRRLY
HRIQDCFNRPISSAPDSWVDVIERYSNDNNKTLKRTAKSTRCLNLGSYNYLGFGSFDEYC
TPRVIESLKKFSPSTCSSRVDAGTTSVHAELEECVAKYVGKPAAIVTGMGFATNSVIIPV
LIGKGGLIISDSLNHTSIVNGARGSGATIRVFQHNTPAHLERVLKEQIAEGQPRTHRPWK
KIIVVVEGIYSMEGEICQLPEIVSVCKKYKAYVYLDEAHSIGAIGKTGRGVCELLGVDTA
DIDIMMGTFTKSFGSCGGYIAGSKELIQYLKYHCPAHLYATSISTPSAQQIISSIKVILG
EDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
ENVAVVVVGFPATPLLLARARICISASHSREDLIKALKVISKAGDLTGIKYFPAAPKKQE
EEKDRIKLD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgataacgatcccatacctaacggcggtatcaacatacttcagctacggattgctattc
gccttcgggcagcttcgggattacacacgcctgatcttcgattggtgctcaaccaacaat
ctccacggttacgcccccatctgcttggctcacgaggatttctacatccgtcgtttgtat
caccgcattcaggattgttttaatcgaccgatatcaagtgctcctgattcttgggttgat
gttatcgagaggtactctaatgacaacaacaagaccctcaagcgaacagcaaagagcaca
aggtgccttaatctgggatcttacaactatcttggttttggttctttcgatgagtattgc
acccctcgtgttattgagtctttgaagaagttttccccaagtacatgtagctctcgcgtt
gacgcaggaaccacatctgtgcacgcagagcttgaagaatgtgttgccaagtatgtggga
aaacctgctgctattgtcactggcatgggcttcgctactaactctgttatcattcctgtc
ttgattggaaagggagggttgataataagcgattctttgaaccatacttcaattgtaaac
ggtgctcgtggttcaggagccactatccgcgttttccaacacaacacacctgctcatttg
gaaagagtattgaaagaacaaatcgctgagggacaaccgaggacacacagaccctggaag
aaaatcattgttgttgttgaaggtatttacagcatggaaggggagatttgtcaacttccc
gagattgtctccgtatgcaagaaatataaggcatatgtttacctggatgaagctcacagc
attggagcaattgggaaaacaggcaggggtgtttgcgaacttctcggtgttgacacagct
gatatagacataatgatgggaacttttaccaaatctttcggttcttgtgggggctatatt
gccggatccaaggaactcattcaatatttgaagtaccattgccctgctcacctttacgca
acttcaatttcaactccttctgcgcaacagatcatatcttccataaaagttatccttgga
gaggacggttcaaacagaggtgcgcaaaagttagcaaggataagggagaacagcaacttt
ttcagggctgagttgcagaagatgggatttgaggttcttggagacaatgattccccagtg
atgccaataatgctttacaatccagcaaaaatccctgccttctctagggaatgcttgcga
gaaaacgtcgcagttgtggttgttggtttcccagctacacctctattgctagccagggct
cgtatttgcatatccgcatctcactcaagagaagatcttatcaaagctctaaaggttata
agcaaagcaggtgaccttaccggaatcaaatattttccggcagcaccaaagaagcaagaa
gaagagaaagatagaatcaaattggattaa
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