Ramlibacter tataouinensis: Rta_10440
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Entry
Rta_10440 CDS
T01544
Name
(GenBank) DNA-formamidopyrimidine glycosylase-like protein
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
rta
Ramlibacter tataouinensis
Pathway
rta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rta_10440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rta03400
]
Rta_10440
Enzymes [BR:
rta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Rta_10440
DNA repair and recombination proteins [BR:
rta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rta_10440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
AEG92129
UniProt:
F5Y0A7
LinkDB
All DBs
Position
complement(1083259..1083993)
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AA seq
244 aa
AA seq
DB search
MPEGPSLVILREHASVFQGRRILRVEGDSKLDFDRLRGRTVTDIRTWGKHFLVQVPGVAL
RIHLLMFGSWCIDQRKDKPLRIGLGFAQGRELNFYSCAARYIDEPLDQVYDWRGDVMSEA
FDPALARRRLRALPEQLACDALLNQEILAGVGNIIKNEVLFRIRLHPLSPIGALPAPKLR
ELVDQARQYSFEFYEWKKAGVLRAHWLAHTKSICPRCNIPFHKGHLGLTQRRSFWCERCQ
VRYG
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggcccgtcactggtcatcctgcgtgagcacgccagcgtgttccagggccgc
cgcatcctgcgcgtggagggcgacagcaagctcgatttcgaccggctgcgcggccgcacc
gtcacggacatccgcacctggggcaagcatttcctggtccaggtgccgggggtggcgctg
cgcatccacctgctgatgttcggcagctggtgcatcgaccagcgcaaggacaagccgcta
cgcatcggcctgggcttcgcgcagggccgcgagctgaacttctacagctgcgcggcgcgc
tacatcgacgagccgctggaccaggtgtacgactggcgcggcgacgtgatgtccgaggcg
ttcgatccggccctggcccgccggcgcctgcgcgcgctgcccgaacagctggcctgcgac
gccctgctgaaccaggagatcctggccggcgtgggcaacatcatcaagaacgaggtgctg
ttccgcatccggctgcatccgctgtcccccatcggcgccctgcccgcgcccaagctgcgc
gaactggtggaccaagcccggcaatacagcttcgagttctacgaatggaagaaggcgggc
gtgctgcgcgcgcactggctggcccacaccaagagcatctgcccgcgctgcaatatcccc
ttccacaagggccacctcggcctgacgcagcgccgcagcttctggtgcgagcgctgccag
gtgcgctacggctga
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