Ramlibacter tataouinensis: Rta_18870
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Entry
Rta_18870 CDS
T01544
Symbol
rluD
Name
(GenBank) Uracil hydrolyase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rta
Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:
rta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rta03009
]
Rta_18870 (rluD)
Enzymes [BR:
rta01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Rta_18870 (rluD)
Ribosome biogenesis [BR:
rta03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rta_18870 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AEG92978
UniProt:
F5XX34
LinkDB
All DBs
Position
1990229..1991281
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AA seq
350 aa
AA seq
DB search
MIQGSKFISAGQGPEAAERLPDEGAAEVTGEAELRAFTIAAALHGERLDRALAELVPEFS
RSYLQQLVDAGAVRLNGAVASRPAHRVRAGDTGQIELRPTPQSQAFRPEPMALDVVFEDP
HLLVLDKPAGLVVHPAPGHWSGTLLNGLLARDAKALALPRAGIVHRLDKDTSGLMVVARE
RQTMDALVRLIAAREVSRQYLALAHRPWAGAPVREVDAAIGRDPTNRLRMAVVDLDRQGG
KPASTRIELLQDASEGCWVQATLRTGRTHQIRVHMAHLGHPLVADELYGGAPAAGLRRQA
LHAFRLAFRHPVTGQALEFQSPLPRDLQDALAAWGLRYNRGDRPTSHLPG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ttgatacagggttccaagtttatatcggccgggcaggggcccgaggcggcggaacgcctg
cccgacgagggtgcggccgaggttaccggcgaggccgagctgcgcgccttcaccatcgcc
gcggccttgcatggtgagcggctggaccgggcgttggccgagctggtgcccgagttctcg
cgcagctacctgcagcagctggtggatgccggcgcggtgcggctcaacggtgcggtggca
tcgcgtcccgcgcaccgcgtccgcgccggcgacacgggccagatcgagctgcggcccacg
ccccagagccaagcgttccggcccgagcccatggccctggacgtcgtgttcgaagacccg
cacctgctggtgctggacaagccggccggcctggtggtgcatccggccccggggcactgg
agcggtaccctgctcaacggcctgctggcgcgcgacgccaaggccctggcgctgccgcgc
gcaggcatcgtgcaccggctggacaaggacaccagcggcctgatggtggtggcccgcgag
cgccagaccatggacgcgctggtgcggctgattgcggcacgcgaggtctcgcgccagtac
ctcgccctggcccatcgaccctgggccggcgctcccgtgcgcgaggtggacgcggccatc
ggccgcgatccgaccaaccgtctgcgcatggcggtggtcgacctggacaggcagggcggc
aagccggcctcgacccgcatcgagctgctgcaggatgcgtccgagggctgctgggttcag
gccacgctgcgcaccggccgcacgcaccagatccgggtgcacatggcccacctggggcat
ccgctggtggccgacgaactgtacggcggtgcgccggccgcgggcctgcgccgccaggcg
ctgcatgcgttccgactggcgttcaggcacccggtcacgggccaggcgctggagttccag
tcgccgctgccgcgggacctgcaggacgccttggcggcctggggcctgcgttacaatcgc
ggcgaccggcccaccagccatctccccggctag
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