Rickettsia typhi B9991CWPP: RTB9991CWPP_00955
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Entry
RTB9991CWPP_00955 CDS
T01810
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rtb
Rickettsia typhi B9991CWPP
Pathway
rtb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rtb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RTB9991CWPP_00955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtb03400
]
RTB9991CWPP_00955
DNA repair and recombination proteins [BR:
rtb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RTB9991CWPP_00955
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RTB9991CWPP_00955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
AAA_30
AAA_7
Microtub_bd
AAA_22
DUF87
UB2H
AAA_5
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AFE54894
LinkDB
All DBs
Position
complement(244976..246964)
Genome browser
AA seq
662 aa
AA seq
DB search
MNNFSIISAYKPAGGQPKAIDEIIAGLNSKKRSQMLLGITGSGKTFTMANIIERTNRPTL
IMAHNKTLAAQIYLEMKSIFPKNAVEYFVSYYDYYQPEAYIVRTDTFIEKDSSINEQIDL
MRHSATRSLLERRDVIVIASVSCIYGLGAPDLYYQMTVHLELGQSYPRDKLLNDLINLQY
KRNDIGFERGCFRVKGDHIDIFPSHYSDKAWRLSFFGNELEYIHEFDPLTGEKLTQLDKA
MVFGNSHFVMPQKTINNAISSIEVELQKHLDVLKSQDKLIEAKRLNQRTQYDLEMLTETG
SCKGIENYSRFFTGRNAGEPPPTLFEYLPKDALLFLDESHVSIPQIRAMYNSDRARKEVL
VEHGFRLPSALDNRPLKFEEWEKFRPQTVFVSATPGPFELEETGGTVVELIIRPTGLLDP
ECIIKPATNQVEDLISEIQTTITKGLRILVTTLTKKMAEDLTSYLQDLQYKTYYLHSNIH
TLERIEILRDLRQGNIDILVGINLLREGIDIPECGLVAILDADKEGFLRSEVSLIQTIGR
AARNSRGKVILYADKMTKSIDKAVSETLRRRQIQQEYNKKYGIIPKTINSAIHTLESLEE
IHDNKLDKKQTNTLLNNPAKLKSYMDKLKKEMFKAASNLEFEQAAKLRNQLKTLEKAVLE
LS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttttctattatctcagcatataaaccagcaggcggtcaaccaaaagcaata
gatgaaattatagcagggttaaatagtaaaaaacgctcacaaatgttgcttggtattaca
ggatcaggtaaaacttttactatggcaaatattatagaaagaactaatagacctactctt
attatggctcataataaaactttagctgcacaaatctatttagaaatgaaatcaattttt
ccaaagaatgcagttgaatattttgtctcatattatgattattatcagccagaagcttat
atagtacgcactgatactttcatcgaaaaagattcatcaattaatgaacagattgattta
atgcgtcattctgctacaagatcgttattagaacgtcgtgatgtgatagtaattgcgtct
gtttcgtgtatttatggacttggcgctcctgatttatattatcagatgactgtgcattta
gaacttggtcaaagctatcctcgtgataagttactaaatgatttaataaatctgcaatat
aaacgtaatgatatcggatttgagcgtggctgttttagggttaaaggcgaccacattgat
atttttccctcacattatagcgataaagcttggcgtttatcatttttcggtaatgaactc
gaatatattcatgaatttgacccattaacaggtgagaaacttactcagcttgataaagct
atggtttttggtaattcacactttgttatgccacaaaaaacaataaataatgcaatatca
agcattgaggtagagttgcaaaaacacttagatgtcttaaagtcacaagataaactaatt
gaagcgaaaagactaaaccagcgtactcaatatgatcttgaaatgttaacagaaacaggt
agctgtaaaggaattgaaaactactctcgctttttcacaggacgtaatgccggtgagcct
cctcctacattattcgagtatttacctaaagatgctttattgtttcttgatgaaagccat
gtatcaataccacaaattagagcgatgtataacagcgatcgagcacgaaaagaagtgttg
gtagagcatggatttcgtttaccttctgcacttgataacagacctttaaaatttgaagaa
tgggaaaaatttagaccacaaactgtgtttgtatctgcaactccgggaccattcgaatta
gaagagacaggtggcactgtagtagagctgattatcagacctacaggacttctagatcct
gaatgtattatcaaaccagctactaaccaagttgaggatttaattagcgaaattcaaaca
actatcactaaaggtttacgtatcttagtcactacattaacaaaaaaaatggctgaagat
ttaacatcctatttgcaggatctgcaatataaaacatattatttgcattccaatatacat
actctagaacgtattgaaatattaagagatttaagacaaggtaatatcgatattttagta
ggtattaatctattaagagaggggattgatattcctgagtgcggtttagttgcgatactt
gatgcagacaaagagggatttttacgatctgaagtatcactaatacaaacaataggaaga
gctgcaagaaatagtagaggtaaagttatactttatgcagataaaatgactaaatctata
gataaagctgttagtgaaacattacgtagaagacaaattcaacaggaatataataaaaaa
tatggtataattccaaaaactatcaatagtgctattcatactttagaatcacttgaagaa
atccatgataataaactcgataaaaaacaaactaatactttattgaataatcctgctaaa
ctaaaatcttacatggataaattaaaaaaagaaatgtttaaagctgcaagtaatcttgaa
tttgaacaagctgcaaaactccgtaaccaactcaaaactctagaaaaggcagtactggag
ttaagctaa
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