Rathayibacter toxicus WAC3373: APU90_01625
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Entry
APU90_01625 CDS
T04269
Name
(GenBank) DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
rtc
Rathayibacter toxicus WAC3373
Pathway
rtc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rtc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
APU90_01625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtc03400
]
APU90_01625
Enzymes [BR:
rtc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
APU90_01625
DNA repair and recombination proteins [BR:
rtc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
APU90_01625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF1206
Motif
Other DBs
NCBI-ProteinID:
ALS56640
UniProt:
A0A0C5BDX7
LinkDB
All DBs
Position
complement(354418..354993)
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AA seq
191 aa
AA seq
DB search
MPFTRAELASYRDRTVDDLLGEDVRLLFVGINPGLWTAATGAHFAHPGNRFYPALVAAGI
LNRPLRVSDGMSVEDRRALLERGIGITNLVSRASARADELRSDELRAGATRLVETVTRVR
PAVVALVGITAYRAAFGRRGARQGLQQEDLAGTPLWVLPNPSGLNAHDTVASLGRAYREP
ALAAGIVAEDV
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcacccgcgctgagctcgcttcttaccgtgaccgcacggtcgacgatctcctc
ggtgaggatgtccgcctcctttttgtgggcatcaatcctggtctgtggaccgcggcgacc
ggcgcacacttcgcccacccgggcaaccgtttttacccggcgctggtagcggcgggtatc
cttaatcgtccattgcgtgtcagcgacgggatgagcgtagaagaccggcgcgctctgctc
gagcgcggtatcggtatcaccaaccttgtctctcgggcgagcgcacgcgccgatgaactc
cgctctgatgagctgcgggcgggcgccacgcgcctcgttgagaccgtcacgagggttcgg
cccgcggtggtggcgctagtgggtatcactgcctatcgagctgctttcggtcgccgcggc
gcccggcaggggctgcagcaggaggacctcgctggtacaccgctgtgggtgctaccgaac
ccgagcggactgaatgcgcacgacaccgttgcctccttggggcgtgcctaccgtgagccg
gcgctcgccgccgggattgtcgcggaagacgtgtga
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