Raoultella terrigena: NCTC13098_00616
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Entry
NCTC13098_00616 CDS
T06046
Symbol
rng_2
Name
(GenBank) Ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
rtg
Raoultella terrigena
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtg03019
]
NCTC13098_00616 (rng_2)
03009 Ribosome biogenesis [BR:
rtg03009
]
NCTC13098_00616 (rng_2)
Messenger RNA biogenesis [BR:
rtg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC13098_00616 (rng_2)
Ribosome biogenesis [BR:
rtg03009
]
Prokaryotic type
rRNA processing factors
NCTC13098_00616 (rng_2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
VDR24330
UniProt:
A0A3P8LY45
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All DBs
Position
1:514988..516292
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AA seq
434 aa
AA seq
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MQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPL
GTKGARLTTDITIPSRYLVFMPGASHVGVSQRIESEAERERLKKVVADYCDEQGGFIIRT
AAEGVHEQEMAADAAYLKRVWTKVMERKKRQQTRYQMYGELALAQRVLRDFADAHLDRIR
VDSRLTYESLLEFTAEYMPEMTSKLEHYSGRQPIFDLFDVENEIQRALERKVELKSGGYL
VIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMN
NEDHRRRVLHSLEQALNKDRVKTSINGFSQLGLVEMTRKRTRESVEHVLCKDCPTCHGRG
TVKSVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAETLKGEESTRWRKSKSLSVNRSK
CKLNRSIIKSSLMW
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggcttttgtagatattggcctggataaggccgcatttctgcacgcttcagac
atcatgccgcacaccgagtgcgtcgccggggaagagcaaaagcagttcaccgtgcgcgat
atttccgagctggtccgtcagggccaggacctgatggtgcaggtggtgaaagaccccctc
ggcaccaagggcgcccgcctgaccaccgatatcaccattccttcccgctatctggtattt
atgccaggagcctcgcacgttggggtttcccagcgtattgagagcgaagcggagcgcgag
cggctgaagaaggttgtcgccgactactgcgatgagcagggcggatttatcatccgtacg
gcggcggaaggcgtacacgagcaggaaatggccgccgatgccgcctacctcaagcgcgtc
tggacgaaggtcatggagcgtaagaagcgccagcagacccgctatcagatgtacggcgag
ctggcgctggcacagcgcgtgctgcgcgattttgccgacgcccatcttgaccgcattcgc
gtcgactcccgcctgacctatgaatcgctgctggagttcaccgccgaatatatgccggag
atgaccagcaagctcgagcactacagcggccgccagccgatcttcgatctctttgacgtt
gagaacgaaatccagcgcgcgctggagcgtaaagtggagctgaagtccggcggctatctg
gttatcgatcagaccgaagcgatgaccaccgttgacatcaacaccggggccttcgtcggc
caccgcaatcttgacgataccatcttcaataccaacattgaggcgacccaggcgattgcc
cgccagctgcggctgcgcaacctcggcgggattattatcattgatttcattgatatgaat
aatgaagatcaccgccgccgggtgctgcattctctggagcaggcgctgaataaagatcgg
gtgaaaaccagcatcaacggcttctcccagcttgggctggtggagatgacccgtaagcgc
acccgcgaaagcgtggagcacgtgctgtgcaaggactgcccgacctgccacggtcgcggc
acggtaaaatcggttgaaacggtgtgttatgaaatcatgcgcgagatcgtccgcgtacat
catgcctacgactccgatcgtttcctggtctatgcttctcctgccgtcgcggaaaccctg
aaaggggaagagtccacgcgctggcggaagtcgaaatctttgtcggtaaacaggtcaaag
tgcaaattgaaccgctctataatcaagagcagtttgatgtggtga
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