Rufibacter tibetensis: DC20_00425
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Entry
DC20_00425 CDS
T04099
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
rti
Rufibacter tibetensis
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DC20_00425
Enzymes [BR:
rti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DC20_00425
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Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
ResIII
AAA_30
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ALI97735
UniProt:
A0A0P0C004
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Position
103301..105850
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AA seq
849 aa
AA seq
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MSPTFSISHLPDLPVKEALPRLVSSLENSSRAVLEAPPGAGKTTLVPLALLDTSWRNEGK
IIMLEPRRLAARAAAQRMSDLLGEEVGQTVGYWVRMEHIVSDITKIEVVTEGILTRLLQS
DPGLEGVAAIIFDEFHERSLQADVGLALALDAQAVLRPDLRLLVMSATLDATSVANWLEA
PVVKSEGRQFPVETHYLSPAEMASAGQRPAERLTNLLPKSIRKALEEEPEGDVLVFLPGM
GEMRRVAQALEGKLASTIDLHLLHGDLNLTQQLAAIRPAPAGRRKIVLATSIAETSLTIE
GVKVVIDGGYSRVPKFVPRIGLTTLTTIPVSRAAADQRRGRAGRLGPGVCYRMWSSADQL
QLADRQTPEICEADLTGLALELSIWGAQDPNDLKWLDTPPPAALGLARDLLIRLEALDKT
GKPTAHGKALAALGLSPRLGHLVVRGHALGLGTTACDLAALLSDRDVLKPMQISWADPLP
DLTLRLEILDGHNPPTPGYVVDANTVRKIREQAQNLRQRIREKRSPINFGAVGLLTALAY
PDRLAQRETSGRIRLISGQRATLQTELFGEAEFYAIAHMELGSKPRVLSAAPVSKEELLT
HFAGQLERVEEVRYDASTEKVIARQITRMGALTLEETTITNPNQELVAQALLQALKEKGI
ERFPWSEEAQKTLKRLTFLHQLFPEQWPDVSEEAMDNTMEEWLLPHLLGLRTLEQVSKLD
FKEILLADLSWEQRQEMDRLAPSHLEVPSGSRIGVDYTDPATPVLAVRLQEVFGMLDTPN
VGGGKVPVLMHLLSPASRPVQVTRDLRSFWSTGYFDVRKDLRGRYPKHHWPDDPLSAPPT
RGTKKRPQP
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctactttctcaatttctcatttacctgatttacccgtcaaagaagccctgccg
cggctggtctcttctttagaaaacagctcccgggcagtcttggaagcgcctccgggcgca
ggtaaaaccaccctggttcccttagccttgttagatacctcatggcgtaacgagggcaaa
atcatcatgctggaaccccgccggttagcggcccgggcagcagcccagcgcatgtctgac
ctgctgggcgaggaagtgggccagacggtaggctattgggtgcggatggagcacattgta
tctgacataaccaagatagaagtagttacagaaggaattctaacccgcttgctccagagt
gacccaggcttggagggagtggctgctatcatttttgacgagtttcacgaaaggagcctg
caagccgatgtggggttagccttggccttggatgcgcaggcggtactacggcctgacctt
cggctgttggtcatgagtgcgaccttagatgctacgtctgtggctaattggctggaagct
cccgtggtcaaaagcgaaggtcggcagttcccggtagagacgcactatctctcccccgcc
gagatggcttcggccggacaaagacccgccgagcgtttaacgaaccttttaccgaaatcc
atccggaaagccctggaagaagaacccgaaggagatgtgctggtcttcttacccggcatg
ggcgagatgcgtcgggtggcgcaggctctggagggaaaactagcctccaccatagacctt
cacctgctgcacggagatctgaacctcacgcaacaacttgccgccatcaggcctgctccc
gcgggaaggcgcaagatagtattggccacaagcattgccgaaaccagcttaaccattgaa
ggcgtgaaagtggtcattgatggaggatactcccgcgtgcctaaattcgtgccccgcatc
gggctgaccaccctgacgaccattccagtttccagagccgccgctgaccagcgccgaggc
cgggctggccggttgggacccggcgtttgttaccgcatgtggtcctccgccgaccaactg
caactagccgaccgacagacacctgaaatatgtgaggcagatttaactggtttggccctg
gagttatctatctggggagctcaggacccgaatgatttgaagtggctggatacgcctccc
ccagcagctttgggattagcccgtgatcttctgatccggttagaagcccttgataaaacc
ggaaaacccaccgcccacgggaaagccttagccgcgctcggactttctccccgcttaggc
catttggtggtgcgggggcatgcgttaggcctgggtaccaccgcctgtgatttagctgcc
ctgctttcagaccgcgatgtcttaaaacccatgcagatttcctgggcagatccgctgccg
gacctcacgctacggttagaaatactagacggacataaccctccaacgcccggctacgtg
gtagatgccaatactgtccgcaaaatccgggagcaggcccagaacctgcgacagcgcatc
cgggagaaaagaagtcccatcaactttggcgcggtgggactcttaaccgccctggcgtat
cctgaccgactggcccagcgggaaacctccggccgcattcgcctcatttctggtcaacgc
gccaccttgcagacggagctgttcggcgaagcggagttctacgccattgcccacatggaa
ctagggtccaaacccagggtattgtctgcggctccggtaagtaaagaagaactgctcacc
cactttgcgggccaactggaacgggtagaggaagttcggtatgatgcttccacggaaaag
gtcatcgcccggcagattacccgcatgggggcactgaccctggaggaaaccaccattacg
aaccctaaccaggagttggttgcccaagccctattacaagctttaaaagaaaaaggcatt
gaacggtttccctggtcagaggaagcccaaaagactttaaaacggctgacgtttctccac
caactttttccggaacaatggcctgatgtctccgaagaggctatggacaataccatggaa
gaatggctgttaccgcatttactaggtctacgcaccctggaacaggtaagcaaacttgac
ttcaaggaaattcttctggctgatctttcctgggagcaacggcaggaaatggaccgcttg
gctccttcgcacctggaggttcccagcggctcccggattggtgtggattatacagaccct
gctactcctgtattggcggttcgactacaggaagtcttcggaatgctggacacgccgaac
gttggtggtggaaaggtgccagtcctgatgcatctgctctcccctgcttcccggcctgtg
caagtgacgcgggacttacggagtttctggagcaccgggtattttgacgtccgcaaagac
ctgaggggccgctacccgaaacaccactggccggatgatccactctcagcgcctcccacc
cgaggaactaaaaagaggcctcaaccatga
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