Rufibacter tibetensis: DC20_19560
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Entry
DC20_19560 CDS
T04099
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rti
Rufibacter tibetensis
Pathway
rti00730
Thiamine metabolism
rti01100
Metabolic pathways
rti01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DC20_19560
Enzymes [BR:
rti01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
DC20_19560
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ALJ00781
UniProt:
A0A0P0CFU2
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Position
4727206..4729077
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AA seq
623 aa
AA seq
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MKEEKTPDQQVITRTPLPNSRKVFVPGTLHNIRVAMRVISLNDTVTKVIGGENREVNPPV
TVYDTSGPYTDPNFEIDLKKGLPRLREPWIQARQDVEQLSGLTSDYGRLRAADPSLDNLR
FEHIQAPYRAKAGQNVTQLHYARQGIITAEMEYVAIRENQRIDELKNDASLWQQHAGNSF
GANTPRNYITPEFVRQEIAAGRAIIPSNINHPESEPMIIGRNFLVKINTNIGNSVVSSSI
EEEVEKAVWSCRWGGDTLMDLSTGKNIHETREWIIRNCPVPVGTVPIYQALEKVKGKAED
LTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRVTGIVSRGGSIMAKWCLAHHKE
SFLYTHFEEICEIMKAYDVAFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWKHDVQ
VMIEGPGHVPMHLIKENMEKQLEHCAEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYG
TAMLCYVTPKEHLGLPNKKDVKDGVITYKIAAHAADLAKGHPGAQYRDNALSKARFEFRW
EDQFNLSLDPDTAREYHDETLPAEGAKVAHFCSMCGPHFCSMKITQDVREYAEKLGVEAD
AALEKGMEVKASEFKDKGSEVYL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggaaaagaccccagatcaacaggtgattacccgtacccccctgcccaattcg
cgcaaggtgtttgtgcccggcacattgcacaacatccgggtggccatgcgtgtaatctcc
ctcaatgacaccgtcaccaaagtaataggcggcgaaaaccgagaggtgaacccgcctgtg
accgtgtatgacaccagcggcccttacacagaccccaattttgagattgacctgaagaaa
ggcctgccccgtttacgtgagccctggatccaggcgcgccaagacgtggagcaactttct
ggcctcacttctgactatggccgcctacgcgccgctgacccttcgctggacaacctccgc
tttgagcacatccaagcgccgtaccgcgccaaagccggacagaacgtgactcaattacac
tatgcccgccaaggcataatcaccgctgaaatggaatacgtggccatcagggaaaaccaa
cgtattgacgagctgaagaacgacgcctcactttggcagcaacacgccggcaacagcttt
ggcgccaacaccccgcgtaattacattacgccggagtttgtgcgccaggagatagcggcg
ggccgggccatcattccgtccaacatcaaccaccccgaaagcgagcccatgatcattggt
cgtaattttctggtgaagatcaataccaacatcggcaactcggtggtttcatccagcatt
gaagaggaagtggagaaagccgtctggagctgccgctggggcggagacacgctcatggat
ctgtctaccggcaagaacatccacgaaacccgagaatggatcatccgcaattgcccggtt
ccggtgggcaccgtgcccatctaccaggccctggagaaagtaaaaggcaaagccgaagac
ctgacctgggagattttccgcgacaccctcattgagcaggccgaacaaggcgtagactat
ttcaccattcacgccggggtattgctgcgctacattccgctcacggctaaacgcgtgacc
ggcatagtctcgcgcggcggcagtattatggccaaatggtgtctcgcgcaccacaaggag
agcttcctttacacccactttgaggaaatctgcgagatcatgaaagcctatgatgtggct
ttctccctgggcgacggacttcgccccggttctattgctgatgccaacgacgctgcccag
ttcgcggagttggaaaccctgggcgaactcaccaaaatagcctggaaacacgatgtccag
gtcatgattgaaggaccaggccacgtgcccatgcacctgatcaaggagaacatggagaaa
caactggaacattgcgctgaagctcctttctacaccttaggccccctcaccaccgacata
gccccaggctacgaccacatcacctcggccataggcgccgccatgattggctggtacggc
accgccatgctctgctacgtcacgccaaaggaacacctaggcctgcctaataaaaaggat
gtgaaagacggcgtaatcacctacaaaattgccgcccacgccgccgatctggccaaaggt
caccccggcgcccaataccgcgacaatgccttaagcaaggccaggtttgagttccgctgg
gaagaccagtttaacttgtccctggaccccgacaccgcccgggagtaccatgatgaaacc
ctgcccgccgaaggcgctaaggttgcgcacttctgctctatgtgcggcccgcacttctgc
tccatgaaaattacccaagatgtacgcgagtacgccgaaaagctaggcgtagaagccgat
gccgccctggaaaaaggcatggaagtgaaagcctctgagttcaaagacaaaggcagcgag
gtgtatctgtaa
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