Rathayibacter tritici: A6122_1236
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Entry
A6122_1236 CDS
T04388
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rtn
Rathayibacter tritici
Pathway
rtn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6122_1236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtn03400
]
A6122_1236
DNA repair and recombination proteins [BR:
rtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6122_1236
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6122_1236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_16
AAA_5
AAA_30
TrwB_AAD_bind
DUF87
Motif
Other DBs
NCBI-ProteinID:
AND16381
UniProt:
A0A169BY52
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Position
1417257..1419353
Genome browser
AA seq
698 aa
AA seq
DB search
MSVVTATLRIMEPTRAVHPFEVVSEYKPSGDQPAAIADLSARINAGETDVVLLGATGTGK
SATTAWLVEAVQRPTLVLAHNKTLAAQLANEFRELFPNNAVEYFVSYYDYYQPEAYVPQT
DTFIEKDSSVNAEVERLRHSTTNSLLSRRDVIVVSTVSCIYGLGQPEQYLEAMVALQVGQ
RVDRDRLIRKFVSMQYARNDVDFARGTFRVRGDTIEIIPMYEELAIRIEMFGDEIEALYT
LHPLTGDIVRKLESVSVFPGSHYVASQDVMHRAIDTIQQELEVRLADLEKQNKLLEAQRL
RMRTTFDLEMMQQIGFCSGIENYSRHIDGRESGEAPHCLLDYFPDDFLVVIDESHVTVPQ
IGAMYEGDASRKRTLVEHGFRLPSAMDNRPLKWEEFTSRVGQTVYLSATPGRYEMGIADG
IVEQIIRPTGLIDPEIVVKPTKGQIDDLLEEITRRTERDERVLVTTLTKRMAEELTDFLT
EAGVRVRYLHSDVDTLRRVELLSELRAGVYDVLVGINLLREGLDLPEVSLVAILDADKEG
FLRSSTSLIQTIGRAARNVSGEVHMYADKVTDSMRLAIDETDRRREKQVAYNLDHGIDPT
PLRKKIADITDALAREGADTAKLLAGRDSKKKSPTPNLRRQGLAANGGNDLEAIIADLNG
QMLQAAGELKFELAARLRDEVQELKRELRQMEKAGHLS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtggtcacggctacgcttcggatcatggagccaacccgtgccgtgcacccgttc
gaggtcgtcagcgagtacaagccgagcggtgatcagcccgccgccatcgccgacctgagc
gctcggatcaacgccggcgagaccgatgtcgtgctgctcggcgccaccggaaccggcaag
tcggccaccaccgcgtggctcgtcgaggccgtgcagcgtcccactctcgttctcgcgcac
aataaaacgctcgccgcgcagctggccaacgagttccgcgaactcttcccgaacaatgcg
gtcgagtatttcgtctcgtattacgactattaccagcccgaggcctacgtcccgcagacc
gacaccttcatcgagaaggacagctcggtcaacgccgaggtcgagcggttgcggcactcc
accaccaattcgctcctgagccgccgggacgtgatcgtcgtctccaccgtctcctgcatt
tacggccttggccagcccgagcagtacctcgaggcgatggtggcgctccaggtgggccag
cgcgtggaccgcgaccgcctcatccgcaagtttgtctcgatgcagtacgccaggaacgac
gtcgacttcgccaggggaaccttccgggtgcggggcgacacgatcgagatcatccccatg
tacgaggaactcgcgatccggatcgagatgttcggcgacgagatcgaggctctgtacaca
ctgcatccgctcaccggcgacatcgtccgtaagctcgagtcggtctcggtgttccccggc
tcgcactatgtcgccagccaggacgtcatgcatcgggcgatcgacactattcagcaggag
ctcgaggtacgtctggccgacctcgagaagcagaacaagctcctcgaggctcagaggctg
cggatgcgcaccaccttcgacctcgagatgatgcagcagatcggcttctgctcgggcatc
gagaactactcccggcacatcgacggccgcgagtcgggcgaggccccgcactgtctgctc
gactacttcccggacgacttccttgtcgtgatcgacgagtcgcacgtcactgtgccgcag
atcggcgcgatgtacgagggcgacgcctctcgcaagcgcaccctcgtcgagcacggcttc
cgtctgccctcggcgatggacaaccgcccgctgaagtgggaggagttcacgtctcgcgtc
ggccagacggtctacctctcggcgacccccggtcgctacgagatggggatcgccgacggc
atcgtcgagcagatcatccgccccaccggactgatcgatcccgagatcgttgtcaagccg
accaagggccagatcgacgacctgctcgaggagatcacgcgtcgcaccgagcgcgatgag
cgggtgctcgtcacgacgctgaccaagcgcatggcggaggagctgaccgacttcctcacc
gaggccggcgttcgcgtgcggtacctgcactcggacgtcgacacgttgcgccgagtcgag
ctcctctcggagttgcgcgccggggtgtacgacgtcctcgtcggcatcaatctgctgcgc
gagggtctcgaccttcccgaggtgtcgctcgtggcgatcctcgacgccgacaaggagggc
ttcctccgctcgtcgacgtcgctcatccagaccatcggccgcgctgcccgcaacgtctcg
ggcgaggtgcacatgtacgccgataaggtgaccgactcgatgcggctcgcgatcgacgag
accgaccgccggcgcgagaagcaggtcgcctacaacctcgaccacggcatcgacccgacg
ccgctgcgcaagaagatcgccgacatcaccgacgccctcgcccgtgagggggccgatacc
gccaagctgctcgccggccgcgactccaagaagaagagtcctacgcccaacctgcgccgg
cagggactcgcggccaacggcggcaacgacctggaggcgatcattgcggacctcaatggt
cagatgctccaggcggcgggcgagctcaagttcgagcttgcggcccggctgcgcgacgag
gtccaggagctcaagcgcgagctgcggcagatggagaaggccggccacctgtcgtga
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