Ruminococcus torques: RTO_06170
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Entry
RTO_06170 CDS
T02606
Name
(GenBank) diguanylate cyclase (GGDEF) domain
Organism
rto
Ruminococcus torques
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Motif
Other DBs
NCBI-ProteinID:
CBL25356
UniProt:
D4M294
LinkDB
All DBs
Position
complement(604446..606065)
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AA seq
539 aa
AA seq
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MGDRKKPRSLSEIVNDVLRAVRDYYDSEYVYYIEKEYGDIETIFEWCAENVPWQRDKIKM
LPEEQQPKWMKQEITNSTEADYSVSLQLDENTVAILAAVGVHRGGCDVGLLRTVIPYIPQ
AITLHKLQKQQEYLSYHDNLTGVLNRNSFVAYLDHVEPEELKTLGALSVDINGLKNFNKE
FGRDYGDEVVTRVGEVLSEYFHNGNVYRMTGDEYLVLVENASYEDFTQQVHGAYTKLENI
SLGLVSVGYAWGKVDIDVNGLVISAENMMREEKKKYYKNLRKGHHEPIIKKDLLEDIEQK
NFIVCLVPKIDVQTGEIAGAEAIVRYHHKDLGIMDPGRYINLLEETRLSHYLDLYIFEQV
CQILHKWETEGIQMVPISVNFAGETLRQENIADQMSALIEKYQVLCEYLEVEVSESYTDT
NQEMLAASCSKIRKANVRVVLDHFGAKNSSFSILSIMDFDGLKLDESLITNLVGNRRSRV
VAKAVIDICHQLGCSVLAESVETQDQLNVLQELGCDYAQGTLFNKPIKVETFEVRYLKE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatagaaaaaagccacgttctctttcagaaatcgtaaacgatgtacttcgtgcg
gtacgtgattattatgattcagaatacgtgtactatattgagaaagagtatggggatatt
gagaccatctttgagtggtgtgcagagaatgttccatggcagagagataagataaagatg
cttccggaagaacagcagccaaagtggatgaagcaggagattacaaattcaacagaggcc
gattacagtgtgagtttgcagctggatgagaatacagtagcaattcttgcagcagttgga
gttcaccggggcggatgtgatgttggattgcttcgtacggtgattccgtatataccgcag
gcaatcactcttcataaactccagaaacagcaggagtatctcagttatcatgataatctg
acaggagtacttaacagaaatagttttgttgcatatctggatcatgtggaaccggaagaa
ttgaagacattgggagctctttctgtagacattaatggactgaagaattttaataaagaa
tttggcagagattatggagatgaagttgtcaccagagttggtgaagtgctttcggagtat
ttccataatggtaatgtatacagaatgacaggcgatgagtatctggttcttgtagagaac
gcttcatatgaagatttcacacaacaggtacatggtgcatatacaaagcttgagaacata
agtcttggactggtttcagtagggtatgcctggggaaaagtagacatagatgtgaatggt
cttgtgatcagtgcagagaatatgatgcgggaagagaaaaagaagtattataaaaatctg
cgtaaaggtcatcatgagccaatcatcaaaaaggatcttctagaggatattgaacagaag
aattttattgtatgtctggtaccgaagattgatgtgcagaccggagaaattgcaggtgct
gaagcgattgtcagatatcatcataaggatcttggaattatggatccgggaagatatatt
aatcttctggaagagacaaggttgtcacattatctcgatctctatatatttgaacaggtt
tgtcagatccttcataagtgggagacagaaggaatccagatggtgccgatttcagtaaac
tttgcaggtgaaacattgaggcaggagaacattgcggatcagatgagtgcgctgattgag
aaatatcaggtattatgcgaatatttggaagtagaagtatccgaatcttatacagatacg
aatcaggagatgctggcggcatcatgcagtaagatcagaaaagcgaatgtccgcgtagta
ttagatcatttcggagctaagaattccagcttttcgattctgtccattatggattttgat
ggattgaagctggatgagagcctgattacaaatctggttggaaacagaagaagcagagta
gtagcaaaggccgtaattgatatttgtcatcaattgggatgttctgttcttgcggagagt
gttgaaacacaggatcagctgaatgttcttcaggaattaggatgcgattatgcacaggga
acattatttaataaaccgatcaaagtggagacatttgaagtgcgatatctgaaggaatag
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