Rhincodon typus (whale shark): 109912504
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Entry
109912504 CDS
T06055
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109912504
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rtp03310
]
109912504
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109912504
Nuclear receptors [BR:
rtp03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
109912504
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109912504
NCBI-ProteinID:
XP_048470220
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Position
29:complement(22295722..22337260)
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AA seq
466 aa
AA seq
DB search
MSSSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRQRNCLIDRTNR
NRCQHCRLQKCLTLGMSRDAVKFGRMSKKQRDSLYAEVQKHQQHQEQLASKEDSEGLARV
YTNSVSSGLGDLDDISSTFSDGLLFDFPLTPDGGNSFYNFDLSTSAEPSPDQSAIDMSDI
KHIKQESIYEIMLEPSLFSYPSPESGQLASEISMAEIDRIAQNVVESHSETCQYTAEELK
QLAWQPYTQEEIRNFQNKSCEAMWQQCAIQVTNAIQYVVEFAKRISGFMDLCQNDQIILL
KAGCLEVLLVRMCRAYNPLNNTIFFEGKYGDTQIFKSLGCDDLINIVFDLAKSLCCLHLT
EEEIALFTAGILLSPDRPWLTEARKVKKLQDKIFEALQHVIHKNQLDDDKLSKLISKLSV
VKSVCNLHVDKLQLFKLLHPQTVHNFPPLYKEVFSTEMQYPDSSNS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgtcccaaattgaagtgataccgtgtaaaatctgtggagataaatcttcagga
atccactatggagtcatcacttgtgaaggatgtaaaggcttcttcaggagaagccaacaa
aataatgctgcatactcctgtcctcgtcagaggaattgcttgattgatcggaccaatcgg
aatcgttgccaacattgccgactgcagaagtgtcttactcttggaatgtcacgtgacgct
gtaaagtttggtcgcatgtccaaaaagcagcgtgatagcctctatgcagaggtacaaaaa
catcaacagcaccaggagcagctggcatcgaaggaagattctgagggattagcacgagtc
tacacaaacagcgtcagtagtggactgggagatctggatgacatcagcagcacattctca
gacgggctcctgtttgactttccactgacccctgatggagggaacagtttttataacttt
gatctttcaacctctgctgaaccatctccagatcagtctgctattgacatgagtgacatt
aagcatattaaacaagagtccatatatgaaatcatgttggaacccagtttgttctcgtat
ccttcaccagagagtgggcaactagcctcagaaatctcaatggcagagatagatcggata
gcacagaatgtggtggaatcacattcagagacttgccagtacacagctgaagagttgaag
cagctagcctggcagccatatacacaagaagaaatcaggaactttcaaaacaagtcctgt
gaggccatgtggcaacagtgtgcaatccaagtgacaaatgcaatccagtacgtggtggaa
tttgccaaacgaatcagtggattcatggacctgtgtcagaatgatcagattatactcctt
aaagcaggttgcctagaggtcttattggttcgaatgtgccgagcatataaccctttgaac
aatacaattttttttgaaggaaaatatggagacacacagatcttcaaatcattgggttgt
gatgatttgatcaacattgtgtttgacttggcaaaaagcttgtgctgcctgcatttgaca
gaggaagagattgcattattcacagctggcatcttgttatcaccagatcgaccatggttg
acagaagctagaaaagtcaagaagttacaggacaagatttttgaggcattgcaacatgtc
attcacaaaaatcagctggatgatgacaagctatcaaagctgatctccaaattgtccgtg
gtgaagtccgtatgcaaccttcatgtggataagctacagctatttaagttgctacatcca
caaacagtgcacaactttcctccactctacaaggaagtattcagcacagagatgcaatat
ccagactcctccaacagctaa
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