Rhincodon typus (whale shark): 109913277
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Entry
109913277 CDS
T06055
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6-like isoform X1
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00061
Fatty acid biosynthesis
rtp00071
Fatty acid degradation
rtp01100
Metabolic pathways
rtp01212
Fatty acid metabolism
rtp03320
PPAR signaling pathway
rtp04146
Peroxisome
rtp04216
Ferroptosis
rtp04920
Adipocytokine signaling pathway
Module
rtp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
109913277
00071 Fatty acid degradation
109913277
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
109913277
09143 Cell growth and death
04216 Ferroptosis
109913277
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
109913277
03320 PPAR signaling pathway
109913277
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rtp01004
]
109913277
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109913277
Enzymes [BR:
rtp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
109913277
Lipid biosynthesis proteins [BR:
rtp01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
109913277
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of breast milk
109913277
Exosomal proteins of breast cancer cells
109913277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
109913277
NCBI-ProteinID:
XP_020368354
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MQAKEILRNLQLLELDEFSQFFRTIPPPTLVGIASFAAIIAYWLTTRPKPLKPPCDLSMQ
SVEIEGTDQARGSVLGDSLHLMTHYHDDARTMYEVYQRGLHIAGDGPCLGFRKAKHPYQW
LSYKEVATRAENLGSGLLQKNCRSSPDQFIGVFAQNRPEWIIAELACYTYSMVIVPLYDT
LGPEAIRYIINTAEISTVICDKVEKAKVLLKNVEKKETPDLQIVILMDPFDMDLVQMGNN
CGVQILALQEVENLGQMNRRTPVPPRPEDLSIVCFTSGTTGNPKGAMLTHGNVVADFSGF
LKVTESQWLPTSADVHISYLPLAHMFERMVQSVVICHGGRIGFFQGDIRLLSDDMKALHP
TIFPVVPRLLNRMYDKIFSQAGTPVRRWLLEFAARRKAIEVQNGIIRNNSLWDKLFFKKI
QDSLGGKVRMIVTGAAPASPAVLGFLRAALGCQVYEGYGQTECTAGCTFTTPGDWTSGHV
GAPLPCNYLKLTNVDEMKYFSAKGEGEICVKGPNVFKGYLKDTEKTDEALDKDSWLHTGD
IGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYVRSEPVAQVYVHGDSLQSFLVGI
VVPDPEATEAWARKRGFEHSYAELTKSEAFKKAIMEDMVKLGQQAGLYSFEQVKAIYLHY
EMFSVQNGLLTPTLKAKRSEMRNYFRKQIEELYANTSI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaaaggaaatcttgaggaatctgcagctactggaattagatgaattcagccag
tttttccgcacaattcctccaccaacactggtgggcattgcttcatttgcagctattata
gcatactggctaactaccagacccaaacccctgaagccaccctgtgacctttcaatgcag
tcagtggaaattgagggtactgaccaagctcgtggctctgtattaggcgacagcctccat
ctaatgacgcactaccatgacgatgcaaggacaatgtatgaagtataccaacgaggatta
cacatagcaggggatggcccttgcttaggattcagaaaagccaaacacccctatcagtgg
ctttcgtacaaagaggttgcaacccgagccgagaacttgggatctggactgctccaaaaa
aactgcaggtcatctccagaccagttcattggtgtttttgcacagaacagacccgagtgg
attattgctgaactggcatgctatacctactccatggtgatagtgccactttatgacaca
cttggacctgaagccattcgctacataattaacacagctgagatttccacggttatctgt
gataaggtagaaaaagcaaaagttcttttgaagaatgtggagaagaaggagactccagac
ttgcagatagtcatccttatggatccatttgacatggacttggttcagatgggaaataac
tgtggagtgcaaatactggcactccaggaagtggagaaccttggacaaatgaacaggcga
actccagtgcctccacgcccggaggacctatcaattgtctgtttcactagtggaacaaca
gggaatcctaagggagccatgctcacacatggaaatgtggtagctgatttttcaggcttt
ttgaaagttacagagagccaatggttgcctacatctgctgatgtacatatttcctactta
ccattagcacatatgtttgaaagaatggtacagtctgtcgtaatatgtcacggaggtcgg
ataggtttcttccaaggtgatattagacttctgtctgatgatatgaaggctcttcatcca
actatttttcctgttgttccaagactgctaaatcgaatgtatgataagatatttagccaa
gcaggcacaccagtaagacgctggctacttgaatttgcagccagaagaaaggcaattgaa
gtgcaaaatggcatcatacggaacaacagcctctgggacaaactctttttcaaaaaaata
caggatagccttggaggaaaggtgagaatgattgtcacaggagctgcccctgcctcacct
gctgtacttggcttcctaagagcagcactcggttgccaggtctatgaaggttatggacag
actgaatgtacagctggatgtacctttaccacacctggagactggacatcagggcatgtt
ggggctccactaccttgtaattatctcaaacttactaatgtagatgaaatgaagtatttt
tctgctaaaggagaaggagagatctgtgtgaaaggaccgaatgtgtttaaaggctacctc
aaagacactgagaaaacagatgaagcactagacaaagacagttggttgcatactggggac
attggtaaatggttacctaatggcactttaaaaatcatagatcgaaagaaacatatattc
aaacttgctcagggagagtacattgcaccagagaaaattgagaacatctatgtacggagt
gagcctgtagcccaagtgtatgtccatggagatagtttgcagtccttcttggtgggtatt
gttgtaccagatcctgaagccacagaagcctgggcaaggaaaaggggatttgaacattca
tacgcagaactaactaaatcagaggcttttaaaaaagccattatggaagacatggtgaaa
ctaggacaacaagctggcctttattcatttgaacaggtaaaagccatctatctccactac
gaaatgttctctgtccaaaatggcctgttgactccaacacttaaagctaagagatcagag
atgagaaattacttccggaaacaaattgaagaactttacgctaatacttctatatga
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