Rhincodon typus (whale shark): 109916789
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Entry
109916789 CDS
T06055
Name
(RefSeq) beta-1,3-galactosyltransferase 5
KO
K03877
beta-1,3-galactosyltransferase 5 [EC:2.4.1.-]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rtp00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rtp01100
Metabolic pathways
Module
rtp_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
109916789
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
109916789
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109916789
Glycosyltransferases [BR:
rtp01003
]
Glycan extension
Type 1 chain
109916789
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Motif
Other DBs
NCBI-GeneID:
109916789
NCBI-ProteinID:
XP_048459236
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Position
11:15939040..15954681
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AA seq
335 aa
AA seq
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MILSFDRGAIIAYRKMTKSKIVILLCVFSLTFTFLLGILYPDTLHINYMPDNTNKKSISK
EKSKFLIIPESNCSDDPPFIVYLVTVSHSQWKERYAIRQTWGKDQHPDGKRTVAYFLLGY
NTRYQSMILNESLYYKDIIQKNFTDTYYNLTLKVLMGIEWVYEFCPSVSFVMKTDSDMFV
NTYYLTELLSQKNQTQLYTGFIKYNEKPIRYRLSKWYLTNEEYPQSTLPPFCSGTGYVFS
GDLAGKIITVSKDIPILKLEDVYIGLCLQKLNVTPVELNSGHPFHARKVEFSICDFHKLV
TSHQVSPVELLLYWKALRENSKEECWRKMGEFQWA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgattctgtcgtttgaccgaggcgctattattgcttacagaaagatgaccaaaagcaaa
atagtgattttactttgtgtattttctcttacttttacatttttattgggtattctttac
ccagacacacttcatattaattacatgcccgacaacacaaataaaaaatcgatctcaaag
gaaaagagcaaattcctgattatcccagagtcgaactgtagcgacgaccctccattcatt
gtctacttagtgactgtctcacattctcagtggaaggaacgttatgctattcggcaaaca
tggggcaaagatcagcacccagatgggaaaaggactgtcgcctatttcctcttgggatac
aatacgaggtaccagtccatgatattgaacgaaagcctctattacaaggatataatccag
aaaaacttcactgacacatactacaatctcacattgaaagtactaatgggaattgaatgg
gtttacgaattctgcccgtctgtgtcttttgtaatgaaaaccgactctgatatgttcgta
aatacttactatctgaccgaacttctgtctcagaagaaccagactcagttgtacacaggg
tttatcaagtacaacgagaagcctataaggtacagactaagcaagtggtacttgacaaat
gaggagtatcctcaaagcacccttccgcctttttgttcgggaacgggatacgttttctcg
ggtgacctcgctggaaaaatcattactgtttcaaaggatattccgatcctaaagctggaa
gatgtttacattggactgtgtcttcaaaagttaaatgtaactccagtggagctaaactca
ggtcatcctttccacgccagaaaagtggagttctcaatctgtgactttcacaaactggtg
acctcccatcaagtcagcccagttgagttgttgctttactggaaagcattgagagaaaac
agcaaagaggaatgctggagaaaaatgggggaatttcaatgggcatga
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integrated database retrieval system