Rhincodon typus (whale shark): 109918477
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Entry
109918477 CDS
T06055
Name
(RefSeq) host cell factor 2-like
KO
K27390
host cell factor 2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109918477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109918477
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109918477
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
109918477
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
109918477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_1
Kelch_4
Kelch_2
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
109918477
NCBI-ProteinID:
XP_020374001
LinkDB
All DBs
Position
Unknown
AA seq
1491 aa
AA seq
DB search
MAAPSPKWRRVTGATGPVPRPRHGHRVVAIKELMIIFGGGNEGIVDELHVYNTATNQWFI
PAVRGDIPPGCAAYGFICDGTRILVFGGMVEYGKYSNDMYELQASRWEWKKLKPKPPKNG
PQPCPRLGHTLCLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTVELRSGSGVVGWDIPV
THGTPPPPRESHTAVVYKDSKKPKMIIYGGMSGCRLGDLWILDVESLVWTKPATKGSTPL
PRSLHSATVIGNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLAYLHLDGYIWTPVVSDT
LEDNVPRARAGHCAVAIHTRLYIWSGRDGYRKAWNNQVCCKDLWYLETEKPPAPSRVQLV
RASTNSLEVCWGAVPTADAYLLQLQKYDIPPSATTTTTTTMATPSLSNTTLPQKTSCSPV
SPTPAISAAPLPVSKVTSPTSVLIPGMTSAVTTMQVSAAPVSAMPSAAAQLVTVSQQAVQ
TVKAAVSSLPAGVRLVVPAQSTTNAVPLCSYLVNTPATTMLKTAAAQVATSSGSLGPASS
RPIITVHKSSALTVAQQTQVVTTVVGGVTKTFTLVKSPIQVGGGGSLISNLGKMMTLVQT
APVQTGAPITGQATAGSLAQFIQAKGPFPPGTIVRLVTAADGKPATIITTSQAGGIGTKQ
TILGLSSVSPASSKPGATTIIKTIPVSALMAQPNVTGVSASPGIKSPITIITTKVVTSGT
GAPAKIITAVPKFTTGQPGVTQVVLKTPGTPGTILRTVGGTPVTVSGVRLVTPVTVSSSK
PTVSTLLVKGTTGVTTLGTVTAAATTIHAGATGLASSNFTTPVTALARITTLATQAISTT
IDPLAVAPTTLKVTPGIVSTSSIVSTEPVFVISGEAVPSRXTGLVAHTSETQVPVAAEQG
TTAVTVSDNSVQTSDQQIQQAAEEPAHETTETNTTNTATSSTANMSLNQIQPPDVSNNGM
PESVHGETATAGTTNTATTVSAACTGAVTTVTQSTPTPGPSLQAASTASDVTSSSSTSLS
DLSTSQLAPVAETVQNPGCSEIQPSSEQTLKNFAQGAMPQLAENQPSDQSEAFQDLQEKM
ESGKAQEQLSQNSEQQHQHHVTATEPLVVETKPADSIQHKTTAGDVPVPSLPKATECSTI
KPPSEDLASEPGVPNVDSSQHLQHCQNLISQTPEQPAQQKDPLQSPVPLSAPPQTAVLSP
NDTNIQSSQQGQVTEDPHQPTTSSPANSLLAPSSTAAVSPNEVSNSNPLANGKQENSCVQ
LKVMPKKEGNAWYDVGIIKGTNSVVTHYHLPPEGSHGEDASANIPDYSMLKKQELLPGTA
YKFRVAGINACGRGPFSEICAFKTCLPGFPGAPSAIKITKSVDGAHLTWEPPATTAGKIL
EYSVYLAVRSIQVTESKSGSPAQLAFMRVYCGAKPSCVVSSSHLANAHIDCTTKPAIIFR
IAARNEKGYGPATQVRWLQDTXVQGAKGTAKRPTTSPDSTKSGGAKKSKSE
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccctctcccaaatggagacgggtaaccggagccaccggaccggtcccgcgg
ccccgacacggtcaccgggtggtggcgatcaaagagttgatgatcatattcggcggcggc
aacgaagggatcgtggacgagctgcatgtctacaacactgccacaaaccagtggtttatc
cctgcagttaggggggacatcccacctggttgtgcagcttatggcttcatctgcgatggc
accaggatcctggtatttggaggaatggtagaatatggaaagtatagcaatgatatgtat
gaattgcaggcaagcagatgggagtggaagaaattaaaaccaaaacctcctaaaaatggt
ccacaaccctgtccccgccttggtcacaccttgtgtcttgttgggaataagtgttactta
tttggtggcctggctaatgacagtgaagacccaaagaataatatcccaaggtacttgaat
gacttgtatactgtggagcttagatctggatcaggagtggtaggatgggacattcctgtt
acacatggcaccccacctcctccaagagaatctcacactgctgttgtttataaagattca
aagaaaccaaagatgatcatttatggagggatgagtggatgtagacttggtgacctttgg
atattggatgtggaaagcttggtttggactaaaccagcaaccaagggttcgacaccactc
cctcggagtttgcattctgctactgttattggaaataaaatgtttgtctttggtggctgg
gtaccacttgtgatggatgatgtgaaagttgccactcatgaaaaggaatggaagtgcaca
aatacacttgcttacttacatttagatggctacatctggacacctgtagtctcagacaca
ttggaggacaatgtaccaagggccagggctggccactgtgctgttgctattcatactcga
ctttacatctggagtggaagagatggctaccggaaggcttggaataatcaagtctgctgc
aaagatctttggtatttggaaactgaaaagccccctgcgccttcccgtgtgcagttggta
agagctagcacaaattcactcgaagtatgttggggtgcggttcctacagcagatgcctat
cttcttcagctgcaaaagtatgatataccaccatcagccaccaccaccaccacaactacc
atggcaactccatctttgagcaacactactctaccacagaagacttcatgcagccctgtt
tctcctacgcctgctatttctgctgcacctctccctgtttctaaagtcacttctcccact
agtgtgctgatccctggaatgaccagtgctgtaactacaatgcaagtctctgctgctccg
gtgtctgcaatgccttcagcagcagcccagctggtcacagtctcccagcaagctgtgcag
acagtaaaagctgctgtttcttccttacctgctggagttcgtcttgttgttccagctcaa
agcaccactaatgctgtacccctctgtagttatctggtgaacacaccggccacaacaatg
ctgaagacagcagctgcacaagtggcaacgtcatctggctctctgggcccagcttcatcc
cgacctattatcactgtacataaatcgagtgcattgactgtggctcagcagactcaagtt
gttaccactgtcgtaggcggtgtcaccaaaacattcacgcttgtcaaaagcccaattcaa
gttggcggtggaggctccttgatctccaatctggggaaaatgatgactcttgttcagaca
gctcctgtacaaactggtgctccaatcacaggccaggccactgctgggtctttggcacag
ttcatccaggcaaagggtccgtttcctccagggactatcgtgagacttgtaacagcagca
gatggtaagccagcaacaataatcacaacttcacaagctggtggaataggtacaaagcaa
acgattctgggtcttagcagcgtctcaccagccagcagtaaacctggagcaaccaccatc
atcaagaccatccctgtttcagcactgatggctcaacccaatgttacaggtgtatctgca
tcccctggtataaaatctccaataacaatcattacaacaaaagtagtcacatcaggaact
ggagctccagcaaagatcattacagctgtgccaaaatttactacagggcaacctggagtg
acacaggtggttctgaaaactcccggaacacctggtaccatcctgcgaacagttggtggg
actcctgtcacagttagtggagtcagattagttactcctgtcactgtatcttcaagcaag
ccaacagtctcaactttgctagtaaaaggaacaacaggtgttactacattgggtactgtg
acggctgcagcaaccacaattcatgctggagcaacaggtcttgcatcatcaaacttcact
accccagtcacggctctggcgagaataacaacgctggccactcaagcaattagcacaact
attgatcctttggctgtggcaccaacaacattgaaggttacaccaggaattgtctcaacg
tcttctatagttagcactgagcctgtatttgtgatatcaggagaagcagtgccatctcgt
rtaactggcttggttgcacacactagtgaaactcaggtgccagtagctgcagaacaaggc
acaactgcagtaactgtttcagataatagtgtacaaacttcagatcaacaaatacaacaa
gcagcagaagagccagctcatgaaactacagaaacaaatactacaaatacagctacctcc
agtacagcaaatatgtctttaaatcaaattcagccaccagatgtaagtaacaacgggatg
ccagaaagtgtgcacggagaaacagcaactgcaggaacaaccaatacagcaaccactgtt
tcagcagcatgcactggagcagtgaccactgttacacaatctacaccaactccaggccct
tcattgcaggctgcttcaacagcatcagatgttacttcaagcagcagtacatctttgtca
gatctgagtacatcacagttggcacctgtcgcagagactgttcaaaacccagggtgttct
gagattcagccttcttccgaacagacattaaagaactttgctcaaggagcaatgccacag
ttggctgaaaatcagccatctgatcagtcagaggccttccaggacctccaagagaaaatg
gaaagcggtaaagcacaggagcagttgagtcaaaactcagaacagcagcaccagcaccat
gtcactgctactgagcctttagttgttgaaacaaaaccagcagatagtattcaacacaaa
acaactgctggagatgtcccagtaccctcattgccaaaagccacagaatgcagtacaata
aagcctccctcggaagatcttgcttcagaaccaggtgtgcctaatgtagattcttctcag
catttgcaacattgccagaaccttatcagtcagaccccagagcagccagcacaacaaaag
gatccactgcaatctccagtgcctctgagtgctcctcctcaaacagcagtgctgagtcct
aatgatacaaacatacagagtagtcagcaaggccaggtcacagaggatccccaccaacct
accacttcaagtcctgccaattcacttctagcaccctcctccacagcagctgtgtcacca
aatgaagtctctaatagtaatccactggcaaatgggaaacaagaaaattcttgcgtgcaa
ttaaaggtaatgccaaagaaagaaggcaatgcatggtatgatgttggaatcatcaaagga
accaactctgtggtaactcactatcacttgccaccagagggcagccacggagaggatgct
agtgctaatatcccagactacagtatgctcaaaaagcaagaactcctgccaggcaccgca
tacaagttcagagttgctggaatcaatgcatgtggaaggggtccattcagtgagatatgt
gcattcaaaacctgtctccctggatttcctggagctccatctgctataaaaattaccaag
agtgtagatggtgctcatcttacctgggaaccacctgcgacaactgctggcaaaattctg
gagtactctgtttatttagcagtgcgcagcattcaggtgacrgaatcaaaatctggaagc
ccagcccagttggcctttatgcgggtgtactgtggtgcgaagccatcttgtgtggtatcc
tcatcacacctagcaaatgcacatattgattgtacaacgaagcctgccataatttttagg
attgcagcacggaatgagaagggatatggaccagctacacaagttagatggcttcaagac
acargtgtacaaggagccaaaggcactgcaaaacggccaacaacatcaccagatagcact
aagagtggcggtgccaagaaatccaagtctgaatga
DBGET
integrated database retrieval system