KEGG   Rhincodon typus (whale shark): 109918477
Entry
109918477         CDS       T06055                                 
Name
(RefSeq) host cell factor 2-like
  KO
K27390  host cell factor 2
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109918477
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rtp03036]
    109918477
   03029 Mitochondrial biogenesis [BR:rtp03029]
    109918477
Chromosome and associated proteins [BR:rtp03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL-HCF complex
     109918477
Mitochondrial biogenesis [BR:rtp03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    109918477
SSDB
Motif
Pfam: Kelch_5 Kelch_3 Kelch_1 Kelch_4 Kelch_2 Kelch_6 fn3
Other DBs
NCBI-GeneID: 109918477
NCBI-ProteinID: XP_020374001
LinkDB
Position
Unknown
AA seq 1491 aa
MAAPSPKWRRVTGATGPVPRPRHGHRVVAIKELMIIFGGGNEGIVDELHVYNTATNQWFI
PAVRGDIPPGCAAYGFICDGTRILVFGGMVEYGKYSNDMYELQASRWEWKKLKPKPPKNG
PQPCPRLGHTLCLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTVELRSGSGVVGWDIPV
THGTPPPPRESHTAVVYKDSKKPKMIIYGGMSGCRLGDLWILDVESLVWTKPATKGSTPL
PRSLHSATVIGNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLAYLHLDGYIWTPVVSDT
LEDNVPRARAGHCAVAIHTRLYIWSGRDGYRKAWNNQVCCKDLWYLETEKPPAPSRVQLV
RASTNSLEVCWGAVPTADAYLLQLQKYDIPPSATTTTTTTMATPSLSNTTLPQKTSCSPV
SPTPAISAAPLPVSKVTSPTSVLIPGMTSAVTTMQVSAAPVSAMPSAAAQLVTVSQQAVQ
TVKAAVSSLPAGVRLVVPAQSTTNAVPLCSYLVNTPATTMLKTAAAQVATSSGSLGPASS
RPIITVHKSSALTVAQQTQVVTTVVGGVTKTFTLVKSPIQVGGGGSLISNLGKMMTLVQT
APVQTGAPITGQATAGSLAQFIQAKGPFPPGTIVRLVTAADGKPATIITTSQAGGIGTKQ
TILGLSSVSPASSKPGATTIIKTIPVSALMAQPNVTGVSASPGIKSPITIITTKVVTSGT
GAPAKIITAVPKFTTGQPGVTQVVLKTPGTPGTILRTVGGTPVTVSGVRLVTPVTVSSSK
PTVSTLLVKGTTGVTTLGTVTAAATTIHAGATGLASSNFTTPVTALARITTLATQAISTT
IDPLAVAPTTLKVTPGIVSTSSIVSTEPVFVISGEAVPSRXTGLVAHTSETQVPVAAEQG
TTAVTVSDNSVQTSDQQIQQAAEEPAHETTETNTTNTATSSTANMSLNQIQPPDVSNNGM
PESVHGETATAGTTNTATTVSAACTGAVTTVTQSTPTPGPSLQAASTASDVTSSSSTSLS
DLSTSQLAPVAETVQNPGCSEIQPSSEQTLKNFAQGAMPQLAENQPSDQSEAFQDLQEKM
ESGKAQEQLSQNSEQQHQHHVTATEPLVVETKPADSIQHKTTAGDVPVPSLPKATECSTI
KPPSEDLASEPGVPNVDSSQHLQHCQNLISQTPEQPAQQKDPLQSPVPLSAPPQTAVLSP
NDTNIQSSQQGQVTEDPHQPTTSSPANSLLAPSSTAAVSPNEVSNSNPLANGKQENSCVQ
LKVMPKKEGNAWYDVGIIKGTNSVVTHYHLPPEGSHGEDASANIPDYSMLKKQELLPGTA
YKFRVAGINACGRGPFSEICAFKTCLPGFPGAPSAIKITKSVDGAHLTWEPPATTAGKIL
EYSVYLAVRSIQVTESKSGSPAQLAFMRVYCGAKPSCVVSSSHLANAHIDCTTKPAIIFR
IAARNEKGYGPATQVRWLQDTXVQGAKGTAKRPTTSPDSTKSGGAKKSKSE
NT seq 4476 nt   +upstreamnt  +downstreamnt
atggcggctccctctcccaaatggagacgggtaaccggagccaccggaccggtcccgcgg
ccccgacacggtcaccgggtggtggcgatcaaagagttgatgatcatattcggcggcggc
aacgaagggatcgtggacgagctgcatgtctacaacactgccacaaaccagtggtttatc
cctgcagttaggggggacatcccacctggttgtgcagcttatggcttcatctgcgatggc
accaggatcctggtatttggaggaatggtagaatatggaaagtatagcaatgatatgtat
gaattgcaggcaagcagatgggagtggaagaaattaaaaccaaaacctcctaaaaatggt
ccacaaccctgtccccgccttggtcacaccttgtgtcttgttgggaataagtgttactta
tttggtggcctggctaatgacagtgaagacccaaagaataatatcccaaggtacttgaat
gacttgtatactgtggagcttagatctggatcaggagtggtaggatgggacattcctgtt
acacatggcaccccacctcctccaagagaatctcacactgctgttgtttataaagattca
aagaaaccaaagatgatcatttatggagggatgagtggatgtagacttggtgacctttgg
atattggatgtggaaagcttggtttggactaaaccagcaaccaagggttcgacaccactc
cctcggagtttgcattctgctactgttattggaaataaaatgtttgtctttggtggctgg
gtaccacttgtgatggatgatgtgaaagttgccactcatgaaaaggaatggaagtgcaca
aatacacttgcttacttacatttagatggctacatctggacacctgtagtctcagacaca
ttggaggacaatgtaccaagggccagggctggccactgtgctgttgctattcatactcga
ctttacatctggagtggaagagatggctaccggaaggcttggaataatcaagtctgctgc
aaagatctttggtatttggaaactgaaaagccccctgcgccttcccgtgtgcagttggta
agagctagcacaaattcactcgaagtatgttggggtgcggttcctacagcagatgcctat
cttcttcagctgcaaaagtatgatataccaccatcagccaccaccaccaccacaactacc
atggcaactccatctttgagcaacactactctaccacagaagacttcatgcagccctgtt
tctcctacgcctgctatttctgctgcacctctccctgtttctaaagtcacttctcccact
agtgtgctgatccctggaatgaccagtgctgtaactacaatgcaagtctctgctgctccg
gtgtctgcaatgccttcagcagcagcccagctggtcacagtctcccagcaagctgtgcag
acagtaaaagctgctgtttcttccttacctgctggagttcgtcttgttgttccagctcaa
agcaccactaatgctgtacccctctgtagttatctggtgaacacaccggccacaacaatg
ctgaagacagcagctgcacaagtggcaacgtcatctggctctctgggcccagcttcatcc
cgacctattatcactgtacataaatcgagtgcattgactgtggctcagcagactcaagtt
gttaccactgtcgtaggcggtgtcaccaaaacattcacgcttgtcaaaagcccaattcaa
gttggcggtggaggctccttgatctccaatctggggaaaatgatgactcttgttcagaca
gctcctgtacaaactggtgctccaatcacaggccaggccactgctgggtctttggcacag
ttcatccaggcaaagggtccgtttcctccagggactatcgtgagacttgtaacagcagca
gatggtaagccagcaacaataatcacaacttcacaagctggtggaataggtacaaagcaa
acgattctgggtcttagcagcgtctcaccagccagcagtaaacctggagcaaccaccatc
atcaagaccatccctgtttcagcactgatggctcaacccaatgttacaggtgtatctgca
tcccctggtataaaatctccaataacaatcattacaacaaaagtagtcacatcaggaact
ggagctccagcaaagatcattacagctgtgccaaaatttactacagggcaacctggagtg
acacaggtggttctgaaaactcccggaacacctggtaccatcctgcgaacagttggtggg
actcctgtcacagttagtggagtcagattagttactcctgtcactgtatcttcaagcaag
ccaacagtctcaactttgctagtaaaaggaacaacaggtgttactacattgggtactgtg
acggctgcagcaaccacaattcatgctggagcaacaggtcttgcatcatcaaacttcact
accccagtcacggctctggcgagaataacaacgctggccactcaagcaattagcacaact
attgatcctttggctgtggcaccaacaacattgaaggttacaccaggaattgtctcaacg
tcttctatagttagcactgagcctgtatttgtgatatcaggagaagcagtgccatctcgt
rtaactggcttggttgcacacactagtgaaactcaggtgccagtagctgcagaacaaggc
acaactgcagtaactgtttcagataatagtgtacaaacttcagatcaacaaatacaacaa
gcagcagaagagccagctcatgaaactacagaaacaaatactacaaatacagctacctcc
agtacagcaaatatgtctttaaatcaaattcagccaccagatgtaagtaacaacgggatg
ccagaaagtgtgcacggagaaacagcaactgcaggaacaaccaatacagcaaccactgtt
tcagcagcatgcactggagcagtgaccactgttacacaatctacaccaactccaggccct
tcattgcaggctgcttcaacagcatcagatgttacttcaagcagcagtacatctttgtca
gatctgagtacatcacagttggcacctgtcgcagagactgttcaaaacccagggtgttct
gagattcagccttcttccgaacagacattaaagaactttgctcaaggagcaatgccacag
ttggctgaaaatcagccatctgatcagtcagaggccttccaggacctccaagagaaaatg
gaaagcggtaaagcacaggagcagttgagtcaaaactcagaacagcagcaccagcaccat
gtcactgctactgagcctttagttgttgaaacaaaaccagcagatagtattcaacacaaa
acaactgctggagatgtcccagtaccctcattgccaaaagccacagaatgcagtacaata
aagcctccctcggaagatcttgcttcagaaccaggtgtgcctaatgtagattcttctcag
catttgcaacattgccagaaccttatcagtcagaccccagagcagccagcacaacaaaag
gatccactgcaatctccagtgcctctgagtgctcctcctcaaacagcagtgctgagtcct
aatgatacaaacatacagagtagtcagcaaggccaggtcacagaggatccccaccaacct
accacttcaagtcctgccaattcacttctagcaccctcctccacagcagctgtgtcacca
aatgaagtctctaatagtaatccactggcaaatgggaaacaagaaaattcttgcgtgcaa
ttaaaggtaatgccaaagaaagaaggcaatgcatggtatgatgttggaatcatcaaagga
accaactctgtggtaactcactatcacttgccaccagagggcagccacggagaggatgct
agtgctaatatcccagactacagtatgctcaaaaagcaagaactcctgccaggcaccgca
tacaagttcagagttgctggaatcaatgcatgtggaaggggtccattcagtgagatatgt
gcattcaaaacctgtctccctggatttcctggagctccatctgctataaaaattaccaag
agtgtagatggtgctcatcttacctgggaaccacctgcgacaactgctggcaaaattctg
gagtactctgtttatttagcagtgcgcagcattcaggtgacrgaatcaaaatctggaagc
ccagcccagttggcctttatgcgggtgtactgtggtgcgaagccatcttgtgtggtatcc
tcatcacacctagcaaatgcacatattgattgtacaacgaagcctgccataatttttagg
attgcagcacggaatgagaagggatatggaccagctacacaagttagatggcttcaagac
acargtgtacaaggagccaaaggcactgcaaaacggccaacaacatcaccagatagcact
aagagtggcggtgccaagaaatccaagtctgaatga

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