Rhincodon typus (whale shark): 109920087
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Entry
109920087 CDS
T06055
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109920087 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109920087 (pom121)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109920087 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
109920087
NCBI-ProteinID:
XP_048468748
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Position
26:complement(35811624..35847608)
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AA seq
1218 aa
AA seq
DB search
MSPAHKRSLITWAAGLGFALLFSFYILGWYLLGLLAVVSAWVYYSSLQGVGPRPGLRDLL
DRTIAVLLRTRWAEVVHNKLNGGGGHWKGRSRSVRGRPQPGVWNPGRAPVNSCKWELVNC
EERNPLSAACASERSPADFMMGSYLSNENSAQATFGNREIRNRYSRPNPIQTPTRRLSFG
EHQAMMNRFTVTPRRRYPIHQPQYSVPGTLPTVRWDGYQKKNVLSSRNSPMVHSPVTVKI
ARPDANMMRSPLLDYMMSPAISPLIDPCSKATVLSALKESRKRTVEDDAERTSISERENK
RRRHDSSGSGHSAFEPLLANGAPASLIPKPGTLKRSTNSQCSDDPISKRSRTSSISSLSS
TCVSGKHSSPRNPIFSSYSSTRGHVQGAKNYLCVRNASPLSSPASSRSQTPERPGKKMRE
EEVQRSDTSTPVKVDRAEKDQTMEEESVCLLSKLSPSTVDCSPSEGDGKRKRKIPLLSKR
KGDQLTLHPPLELGYTITADDVDSEKKAGLDRIKKALQEKEEPTKSPTPVTTATVPSLSV
TFTAPTGEISADPTATSTSISAVVSSPLLVSLKKMQNCTNAVSNSDSVDGVTSSNMVKVS
EPSAITFKNDLLPPLTTPTTSMAMTTDIAGFKPIDVLNFSCSSITQPLTSPINKSSTKAI
TTTTNSCQISALVSSQENKVNKEPEMSVAVCTGSSAPPSTSLSLPSAVTVKPAVTSVTAP
SAASTAGFKPVFDLPVAQQANVVSTASSLTMPITTPVTLVASIASSCATSTVSFKPVFGN
CSTATTSTTTSAKFTFGQSTQAVVNNEPAVATTSAKSSSTLFPFAASNSLASSNIDLEAK
GSKATFSFGLNVAVSSKPNTTPTAINNISSQQLFQFGSNSSTTTTAAPSDIFQFGKGSAD
ASAASASPLASVFGQTTAVTSQVSTSITPTSNLFGGFGSSVSTTVTTSSGQLALAFGNSA
KSSLFGNATSTPPFGGPTAQLNFGSTGNQSTFGTNAGAAQKTPSKTPAFGNAVTPFNFGA
SAAKSAFPSTTSQSTFGTPGQPLFGGATAQTGFGSASTQPAFGSTSAAFSFGTTTTSTAA
PIFNATKSLSGSTPGSIFGSSQMVGFGSSNQAAVTTSGFTLAASNPNIAAAGFFGSGQSG
FCSSNPSVPFATSTSTTSSQNMFGSALTNQAQQNQSTPQFNFGATNTVENKPVFGGFNFG
APTLNFGAGKLMRCYSVL
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgcacacaagcggtctctgataacgtgggcggcggggctaggcttcgctttg
ctgttttccttctacatcttgggctggtacctgctgggcctgctggcggtggtgtccgcc
tgggtttattactcttcgttacagggagtaggccccaggcccgggctccgagatttactc
gatcgcaccatcgctgttctcctcaggacgcgttgggccgaagtggtacacaacaagttg
aacggaggaggcggtcattggaaagggagaagtcggagtgttagaggcaggcctcagccc
ggagtttggaatccgggccgggccccggtcaatagctgcaagtgggagttggtgaattgt
gaggaacgcaacccgctgtcggcggcttgtgccagtgagcggagccccgccgacttcatg
atgggcagctacttgtcgaacgaaaactcggcgcaggccacttttggcaacagggagata
aggaaccgctacagccggccgaatcccatccagactccaaccaggaggctgtcctttggg
gaacatcaggccatgatgaatagatttacagtgacccctcggcgacggtatccaatccac
cagccccaatattcagtacctggaactctaccaactgtgcggtgggatggctatcagaag
aaaaatgtcttatcatccaggaactcacccatggtacatagtccagtgactgtaaaaatt
gcacgtcctgatgcaaacatgatgcgttcacctctattggactatatgatgtcccctgcc
atatctcctctgattgacccatgctctaaagcaacagtgcttagtgcactcaaagaaagt
cggaagagaacagttgaagatgatgcagaaagaacttcaatctcggaacgagagaacaag
cgaagacgccatgacagcagtggcagtggtcactctgcatttgagcccctgttggccaat
ggagctccagcttctttgattccaaaacctggaaccttgaagaggagcaccaattcccag
tgttcggatgaccccatctccaaaagatcgcgaacatcctccattagctcactgagcagt
acatgtgtgagtgggaagcattcttcccctcgcaaccccattttcagttcttacagttcc
actcgaggccatgttcagggtgctaagaattatctctgtgtacggaatgcatcccccctg
tccagccctgcatcttcacgttctcaaactcctgagagaccaggaaaaaaaatgagagaa
gaagaagtacaaaggtcagatacttctactcctgttaaggtggatagggcagaaaaagac
caaaccatggaagaagaatctgtgtgtctgttgtcaaaattatcaccatcaacagtagat
tgttctccctcagagggagatgggaaacggaagcgcaagattcctctcctatcaaaacgc
aaaggagatcagcttactctgcatcctccgctagagcttggctatacaatcacagcagac
gatgtggattctgaaaagaaggcaggtcttgacagaattaagaaagcattgcaggaaaag
gaagagcccacaaagtcaccaacaccagtgacgacagcaacagtaccctccctgtccgta
acatttactgccccgacaggagaaatttctgctgacccaacagccacatccacctccatt
tctgctgttgtctctagtcctctgctggtcagtttgaagaagatgcagaactgcacaaat
gcagttagtaattcagattctgtagatggagtaacttcaagcaacatggttaaagtctca
gagccttccgctatcaccttcaagaatgatttattgccacctcttacaactcctactact
agtatggcgatgacaactgacattgcagggtttaagccaattgacgttttgaacttttca
tgttcctccatcacccagccacttacaagtccaatcaataaatcttctaccaaagccatc
accactaccaccaactcatgccagatttctgctctagtaagttcacaagaaaataaagtt
aacaaagagcctgaaatgagtgttgctgtatgtacagggagttctgcacctccaagcaca
agtcttagtctgcctagcgcagtgactgtaaagccagcagtcactagtgtcacagctcct
tcagctgccagtacagctgggtttaagccagtctttgatctgccagtagcacagcaagcc
aatgtcgtctcaacagcatcgagcttgacaatgccaattactacacccgtgaccttggtg
gcatcaatagcatcaagctgtgctacctcaactgtttcattcaaaccagtgtttgggaac
tgttcgacagctacaacttcaacgaccacatctgcaaaattcacatttggccagtcaact
caagctgttgttaataatgaacctgctgttgccacaacttctgcaaaatcaagttcaact
ctattcccatttgcagcctccaattcactagcaagttcaaacattgacttggaagcaaag
ggctcaaaagccacatttagttttggtttaaatgtagctgttagttcaaaaccaaataca
actcctactgcaattaacaacatatcatcacagcaactgtttcaatttggttcaaattct
tcaacaaccaccacagcagcacccagtgacatattccaatttgggaagggctctgcagat
gcatctgcagcatcagctagcccactagcttctgtctttggacaaacaacagcggtcaca
agccaggtgtcaacaagtatcacacccacttcaaatttattcgggggttttggttcttca
gtgtcaacaactgttaccacctcaagtggacaacttgctcttgcatttggaaactcagca
aaatcttccctgtttggtaatgccacaagcacaccaccttttggtggtccgacagcccaa
cttaattttggaagcacaggcaatcagtcaacatttgggacaaatgctggagcagctcag
aaaaccccaagtaaaactcctgcctttggcaatgctgttactccgttcaactttggagct
tctgcagccaaatcagcttttccaagtaccacttcgcagtctacgtttggaactcctggc
cagccattgttcgggggtgcaacagcccagactggatttggatcagcttctacacagcca
gcatttggcagcacctcagcagctttctcatttggtacaaccaccacttccactgctgct
ccaatattcaacgctaccaagagtttgagtggtagtacacctgggtcgatctttggctct
tcacagatggttggctttggttcatcaaaccaggcagctgtaacaactagcggtttcact
cttgctgcatcaaatccaaatatagctgcagctggcttctttggttcaggtcagagtgga
ttttgctcttcaaatccttccgtcccatttgccacttccacctcgacgacgtcatctcaa
aatatgtttggttcagcattgactaaccaggcccagcagaaccagagcactccacagttt
aactttggagccacaaatacagttgagaacaaacctgtatttggagggttcaactttgga
gctcccactttgaactttggggctggtaagttaatgcgatgctacagtgttctgtaa
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