Rhincodon typus (whale shark): 109926392
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Entry
109926392 CDS
T06055
Symbol
mars
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00450
Selenocompound metabolism
rtp00970
Aminoacyl-tRNA biosynthesis
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
109926392 (mars)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109926392 (mars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rtp01007
]
109926392 (mars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtp03016
]
109926392 (mars)
Enzymes [BR:
rtp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
109926392 (mars)
Amino acid related enzymes [BR:
rtp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
109926392 (mars)
Transfer RNA biogenesis [BR:
rtp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
109926392 (mars)
Prokaryotic type
Other AARSs
109926392 (mars)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
GST_C_2
zinc-ribbons_6
Motif
Other DBs
NCBI-GeneID:
109926392
NCBI-ProteinID:
XP_020381842
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MTVDTAPMPVPLYSIGRYLFTLXGEEPNDITNQWLEWDATQLQTAVSAALRATVLQKRKV
EDSLGTLRRQLSHLNQALLDATSPCLTSGTVTVADVVLWGDLYPLLQDVSCLPGEFEALR
GWLQQLSQTRACRRAAAAVLDGGGLEVFRSHLQKLPAPAPLSERPPSNDCEEGDAPDCQL
TEEEVQAADEAWHSGLSALPKPGKVQHPVLPKPSERNILITSALPYVNNIPHLGNIIGCV
LSADVFARFCRLRGWNTLYICGTDEYGTATETKAVEEGLTPRQICDKYNAIHSDIYSWFQ
ISFDYFGRTTTEHQTRIAQDIFRRLLERGFLRSDTVDQLRCEACERFLADRFVEGHCPFC
GYEEARGDQCDLCGKLINAVELKNPQCKICRATPVIRTSKHLFLELPKLEEKLETWLQRS
IETGDWTANARFITHSWIRDGLKARCITRDLKWGTPVPLEEFKDKVFYVWFDAPIGYISI
TADYTEHWEKWWKNPEEVKLYNFMAKDNVPFHSVVFPCSLLGADDNYTLVNSLIATEYLN
YEDGKFSKSRGVGVFGDMAKETGIPVDIWRFYLLLVRPEGQDSSFSWHDLMLRNNAELLN
NLGNFVN
NT seq
1823 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggacacagcaccgatgcctgtgccactttattccattggcagatatttattt
accctcagmggtgaggagccaaatgatataactaaccagtggttggaatgggatgccaca
cagttacagacggcggtgtctgcggctctccgagccacggtgctccagaagaggaaggtc
gaggattccctgggaacgttgaggaggcagctgtcccacctcaaccaggccctactcgat
gcaaccagtccctgcctgacctcggggactgtgacagtagctgatgttgtactctgggga
gacctgtaccccctcctacaggatgtctcctgtcttccaggggagtttgaggctctgcgg
ggttggctgcagcagctgagtcagactcgcgcctgtcgcagagcagcagctgcagtgctg
gatgggggtggcctggaggtcttcagaagtcacctgcagaagctgcccgccccagccccg
ctgtccgagagaccaccctccaacgactgtgaggaaggcgatgcccctgactgccaactg
actgaggaggaggtccaggcggctgacgaagcgtggcacagtgggctgtctgcgctgccg
aaacctgggaaggtgcagcaccctgtgttgcctaagccgagcgagcggaacattctgatc
accagtgcactgccctacgtcaataacataccccacctgggcaacattattggctgtgtg
ctgagtgcggacgtgtttgccaggttctgtcggctgaggggctggaacaccctgtacatt
tgtggcacggacgagtatggcacagcgacggagaccaaggccgtggaagaggggctgacc
ccccgccagatctgtgacaagtacaacgccatccacagcgacatctactcctggttccag
atctccttcgattacttcgggcgtaccaccacggagcaccaaaccaggattgcccaggac
atcttcaggcgattgttggagcggggtttcctgcgcagcgacaccgtggaccagctgcga
tgtgaggcctgcgagagattcctagctgaccgtttcgtcgagggacactgcccgttctgc
ggctacgaggaggccaggggtgaccagtgtgacctgtgcggtaaactcatcaacgcggtg
gagctgaaaaatcctcagtgcaaaatttgtcgagcgactccggtcatcagaacatccaag
cacttattcctggaacttcccaaactggaggagaagctggagacctggctacagaggtct
atagagaccggagactggacagcgaacgctcgcttcatcacacactcctggattcgagat
ggcctcaaggcacgctgcatcaccagggacctcaagtgggggactcctgtaccactggag
gagttcaaggacaaggttttctacgtgtggttcgatgctccaattggttatatctccatc
actgctgactacacagagcattgggagaaatggtggaagaatccggaagaggttaaactg
tacaatttcatggcgaaggacaacgtccctttccacagtgtggtcttcccctgttccttg
ctcggggctgacgataactacaccctggtgaacagcctcatcgctacagagtacctgaac
tatgaggatgggaagttctccaagagccggggcgtcggtgtgtttggggacatggcgaag
gagactgggataccggtcgacatctggaggttttacctgctccttgtccgtcccgagggg
caggacagctccttctcgtggcatgacctgatgctgaggaacaacgctgagctcctcaac
aacctgggcaacttcgtcaacag
DBGET
integrated database retrieval system