Rhincodon typus (whale shark): 109927253
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Entry
109927253 CDS
T06055
Symbol
l3mbtl1
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109927253 (l3mbtl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109927253 (l3mbtl1)
03036 Chromosome and associated proteins [BR:
rtp03036
]
109927253 (l3mbtl1)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
109927253 (l3mbtl1)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
109927253 (l3mbtl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
DUF2116
Motif
Other DBs
NCBI-GeneID:
109927253
NCBI-ProteinID:
XP_020382810
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Position
19:20793283..20868182
Genome browser
AA seq
869 aa
AA seq
DB search
MNSRVGLEVLLPSSVTAPRDVSLQVVSSNSPTQNDRLSTKAFIIPVSPAENNRKPQNFSR
ENQGASLPIEGEQSDSTVPVTAAISPLITAAHKCDMVSVLEWKDGIATLPGSNLKFRLNE
FGVLEVISTEGVVTESLSEVSVDTKTKAESDACSEAGWNTTSPNELKQTGISYMNELPHI
ESACCCVNCGHSYTVNEIRSNRRFCSELCLRQFKEKSLRMGSAAIKRSAGAILKRVKKRK
RKVCLSPSSDSDEEYDYELTEPEQVDEKKEDLKNIREHFMDDNIHTEFRQSQLNESSYTV
TGQTASVIEKNKIWSWALYLEEEKAIAAPVKLFREYQSFPLNKNGFRAGMKLEGIDPTHP
SMYFVLTVFEVCGYRLRLHFDGYSECHDFWVNANSPDIHPAGWCEKTGHKLHLPKGHKEE
EFNWPNYLKITKSQAAPKQLFINQNTMITPLGFRVGMKLEAVDRMNPSLICVATVTDIIE
NRFLVHFDNWDDTYDYWCEASSPYIHPVGWCQQHGKQLTPPQGYTHPEHFSWDRYLEETG
SSAAPARAFKVRPPHGFQRNMKLEAVDRRNPVLIRVATIVDVDEHKLKIYFDGSTSAYSY
WVDTDNPDIHPAGWCARTGHYLQPAIKLSDSSTEPGQRGCPAPGWKAVSHAKSSKYTTHH
RKCPTPGCDGSGHVTGKFTAHHRLSGCPLAERNQARMKIEMSDAEGSSRKRNLLSFGRRK
KSRHHGRIGRPPKYHKIQQEELKVSFQNIPKDGMHQDLHQSVFMSAMSPHPARSLSLCWE
QHCKLLPGVAGISASRVAKWTIEEVGNFVQTLTGCEQQAKLFKEESIDGEAFLLLTQVDI
VKIMSIKLGPALKIYNSILMFKSADDTST
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcagagtgggattggaggtcctgttgcctagtagtgtgactgcacccagggat
gtcagcctacaggtagtgagcagcaacagccctactcaaaatgatcgcctgtcaactaaa
gccttcattattccagtcagtccagctgagaataatcgaaaaccacagaatttctccaga
gaaaaccaaggtgcttctttgccaatcgaaggggaacagtccgacagcactgtgccagtg
actgcagcaattagtccactgattactgcagcacacaaatgtgacatggtcagtgttttg
gaatggaaagatggtattgctaccttacctgggagcaatttgaagttccgattgaatgaa
ttcggtgtcctggaggttatcagcacagaaggtgttgtgacagagtcattgtcagaggta
tctgtagacactaaaacaaaagcggagagtgatgcttgcagtgaggctggctggaataca
acttctccgaatgaattgaaacagactggtatatcttatatgaatgagctgccacatata
gaaagtgcctgctgctgtgtgaactgtggtcactcttacacagtgaacgaaatcagaagc
aatagaaggttctgcagtgagctttgcttgcggcaatttaaagagaagtcactcagaatg
gggagtgcagcaatcaagagaagtgctggagcaatacttaaacgggttaaaaagagaaaa
aggaaagtgtgcctaagccctagttcagactcagatgaagaatatgattatgagttgact
gagccagagcaggtggatgagaaaaaagaagatttaaaaaatatcagggagcacttcatg
gatgacaacattcacacggaatttaggcaaagtcaactgaatgaatccagttatacagtc
actggacagactgcctctgtaattgaaaagaacaaaatttggtcttgggctttatatttg
gaagaagaaaaggctattgctgcccctgtcaagctctttcgtgagtatcagtccttccca
ctgaataaaaatggtttcagagcaggaatgaagttagaaggtattgatcctacacatcca
tcaatgtactttgtactcaccgtgtttgaggtttgtggttatcgtttgcgactccatttt
gatggttattctgagtgtcatgatttctgggtgaatgcgaactctccggatatccatcct
gcaggatggtgtgagaagacaggtcacaaattacatctgcctaaagggcacaaagaggaa
gaattcaattggccaaattatctgaagattacaaagtcacaagctgcaccaaaacagctc
ttcatcaatcaaaatacaatgattacccctttgggatttcgtgttggaatgaaactggaa
gcagttgatagaatgaacccatctctaatttgtgttgccacagtgacagatatcattgaa
aacaggttcctggttcattttgacaactgggatgacacatatgattactggtgtgaagcc
agcagtccatacatccaccctgtaggttggtgtcagcagcatggtaaacaactgacacct
ccacaaggttacactcatccagagcatttttcttgggatagatatttagaagaaactgga
tcttctgctgctcctgctcgtgcatttaaagttcgtcctccacatggtttccagagaaat
atgaagctggaagctgtagacagacgcaatccagtgctgattcgtgtagctacaattgta
gacgttgatgagcacaagttaaagatctattttgatggatcaacctctgcctacagttac
tgggtagatactgataatccagacatacatcctgcagggtggtgtgccagaacaggacat
tatctccagccagcaattaaactgtcagattcttcaactgaacctgggcaaagaggatgc
ccagctccagggtggaaagctgttagtcatgcaaaaagttccaaatacaccacccatcat
cggaagtgcccaactcctggttgtgatggctcggggcatgttactgggaagttcactgct
catcatcgtctatcaggctgcccattagctgaacggaaccaagcacggatgaagatagag
atgtcagatgcagaaggatcttccagaaaaagaaatctattgtcctttggtcgaagaaag
aaatcaagacatcatgggaggattggtcgtccacctaagtatcataagattcaacaagag
gaattaaaagtcagctttcagaacattccaaaagatggtatgcaccaagacttgcatcaa
tcagtctttatgtctgccatgtccccacatccagctcgttcattgtccttatgctgggaa
caacattgtaagctgcttccaggcgtagctggtattagtgccagcagagtggccaaatgg
actattgaagaggtgggaaactttgtccagacactcactggctgtgagcaacaggcaaag
ctcttcaaagaagagtcaattgatggggaggcttttctccttctaacacaagtggatatc
gtgaagatcatgagcattaaacttggtccagcattaaagatttataactcaattcttatg
ttcaaaagtgcagatgatacttcgacatga
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