KEGG   Rhincodon typus (whale shark): 109927346
Entry
109927346         CDS       T06055                                 
Symbol
tbpl2
Name
(RefSeq) TATA box-binding protein-like 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109927346 (tbpl2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rtp03000]
    109927346 (tbpl2)
   03021 Transcription machinery [BR:rtp03021]
    109927346 (tbpl2)
Transcription factors [BR:rtp03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    109927346 (tbpl2)
Transcription machinery [BR:rtp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     109927346 (tbpl2)
  RNA polymerase III system
    TFIIIB
     109927346 (tbpl2)
  RNA polymerase I system
    SL1/TIF-1B
     109927346 (tbpl2)
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 109927346
NCBI-ProteinID: XP_048455755
LinkDB
Position
8:complement(44067025..44119361)
AA seq 301 aa
MIPYDSDLKIDEPCYPPLCQPKESTTELTSADLSFLSDDQEDNDEDENTSKEPSVQQSQV
LSEIQGTHAAGGLGPEDNSEESYHSTNNTISTPITNESPSVCPIPMTPMTPVTPMTPVES
SGICPQLQNIVSTVNLACKLDLKRIALCARNAEYNPKRFAAVIMRIREPRTTALIFSSGK
MVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQ
QFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRSEIYEAFENIYPILKGFKKA
S
NT seq 906 nt   +upstreamnt  +downstreamnt
atgattccctatgattctgatttaaaaattgatgagccttgttaccctccactttgtcaa
cccaaagaatctacaactgagctgacttcagcagatcttagtttcctcagtgatgaccaa
gaagacaatgatgaggatgaaaacacaagtaaggagccaagtgtgcagcagagccaagtg
ctgtcagaaatccagggtacccatgctgctggtggacttggacctgaagataatagcgag
gagtcataccattcaacaaataatacaatttccaccccaatcaccaatgaatcaccttct
gtttgtccaataccaatgacacctatgactcctgtaacaccaatgaccccagtagaaagt
tctggaatatgtccccagttacaaaatattgtttccactgttaatttggcctgcaaattg
gacctgaagagaatagccttatgtgcaagaaatgctgaatataatccaaagcggttcgct
gcagtgataatgcgaataagagagcccagaactacagcattaatcttcagttcaggcaag
atggtttgcactggagccaaaagtgaagaacagtcccgattagcagctaggaaatatgca
cgcgttgttcagaaacttggatttccagcaaagtttcttgattttaaaatccagaacatg
gttggaagttgtgatgtgaaatttcccatcagattagaggggttggttctcacccaccaa
cagttcagcagctacgaaccagaattgttcccaggtcttatttatagaatggtcaaacca
agaattgttctgctaatatttgtctctggcaaggttgttttgacaggtgccaaagtacgt
tcagagatctatgaagcctttgaaaacatctatcccatcttgaagggctttaagaaagca
tcatga

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