Rhincodon typus (whale shark): 109927492
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Entry
109927492 CDS
T06055
Definition
(RefSeq) lysophosphatidic acid receptor 4-like
KO
K04275
lysophosphatidic acid receptor 4
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109927492
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109927492
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
109927492
G protein-coupled receptors [BR:
rtp04030
]
Rhodopsin family
Lipid
Lysophosphatidic acid
109927492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srv
Virul_fac_BrkB
7tm_4
Motif
Other DBs
NCBI-GeneID:
109927492
NCBI-ProteinID:
XP_020383105
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MNNSQELISEGNCNLEANFQYYLFPVIYSIVFIVGLIGNVTALCLLIKKMKKSSPSYMYI
TNLAVVDIIYICTLPFRIHYHVKKNHWPFGDITCRITGTLYFANIYISVAFLSLICIDRY
IAVVYPRKYIRMRSTHCSXIISALVWIFSLTVMLSLVSGGSLTSTFKNNMTACFENYDPE
IWSNRMAAYNIVVLLFGFVIPFTIIVIFYPLAAKKIAQLKGGVHREKALTMIRVILVISV
FCFVPYHATHLLHFLTRLKFIQNCAFSRFVYKFRRITMALVSLNSILDPVIYYFTTIHFK
LNYNKQKRSIKQILHYDRDDELVRQDKGVAWQKTEI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaataactcacaggagcttatctcagagggaaactgcaatcttgaagccaatttccag
tactatttgtttccagtcatctacagcattgtgttcattgtgggcttgatcggcaatgtc
acagccctgtgtctcttgatcaagaaaatgaagaaatcctccccatcttacatgtacatt
acaaacctggctgtggtagacatcatttacatttgcaccttacctttcagaatccactac
catgttaaaaagaaccactggccctttggggatataacctgccggattacgggcacactc
tattttgctaatatatacatcagtgttgcttttcttagcctcatttgtatcgaccgttat
attgcagtggtctatccgagaaaatacatcaggatgaggagcacacactgctcaamgatc
atctcagctctggtatggatcttctccctgactgttatgctttccctagtctctggtggc
tcacttacctccaccttcaaaaacaacatgacagcttgctttgagaactatgatccagag
atctggagcaacagaatggcagcctacaacatagtggtgcttttgtttggttttgtcatc
ccattcaccatcatcgtgatattttaccctttggcagctaagaaaatagcccagctgaaa
ggtggtgtccacagggaaaaggctttgacaatgattcgagtcattttggtgatctcagtt
ttttgttttgtcccttatcatgccacccatttgctacatttcctcactcgcttgaaattt
attcagaactgtgctttcagcagatttgtctacaagttcaggagaattaccatggccctt
gtcagcctcaacagcattttagaccccgtgatatattacttcacaaccattcattttaag
ttaaattataataaacaaaagaggtcaattaagcaaattttacattatgatcgagatgat
gaattagttcggcaggataaaggtgttgcgtggcagaaaacagagatctga
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