KEGG   Rhincodon typus (whale shark): 109927965
Entry
109927965         CDS       T06055                                 
Name
(RefSeq) methylcytosine dioxygenase tet3-like isoform X1
  KO
K24309  methylcytosine dioxygenase TET2/3 [EC:1.14.11.80]
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rtp03000]
    109927965
   03036 Chromosome and associated proteins [BR:rtp03036]
    109927965
Enzymes [BR:rtp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.80  methylcytosine dioxygenase
     109927965
Transcription factors [BR:rtp03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    109927965
Chromosome and associated proteins [BR:rtp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    109927965
SSDB
Motif
Pfam: Tet_JBP zf-CXXC
Other DBs
NCBI-GeneID: 109927965
NCBI-ProteinID: XP_020383558
LinkDB
Position
40:complement(423465..755423)
AA seq 2174 aa
MLDSTEYPNSTLTDKDGQWIKEDFNLVEKPLAISSVKSGKINQLNGNLVHASGNSNAGSL
RQFVFHSIVNQTEGPVLLKPIGKSKVLVGADVQNSKIRNKSAKKSVLSSSAAITSVFPKT
KKAMLKKTKPVVNADNSSPCIKATSEDGFGSGATIEDHQLTDEYSKSSYEDCDVDTIVMP
SKLKTPVLSSVDTPVYQKKKRKRCGVCDPCMKKDNCGECSNCKNRKTGHQICKQRKCEEL
KKKPGFFHEVGNKDNTKAQRKKQTLAEKTGSERSSVDGPRTDQMEEGSTNHVGESRLRLE
MAPSLVNGVCSQDGHPIDVESSEWMDNQRLPEHTNGNNNRGTTQLLNQVRNHIKEDLATT
EDTVILDDARKLSALPETAVSIPSYNSPAQNSQPLHRINFTEKCKPEINNSSDTVNMNDD
CPPNDDLSTLTTAWTLAKKYGKKPPNCNCDGPECPDYLEWLEKKIKAVLNEEQNGTSQIP
DKISDMPVENGASTNHTPTLEEPSIFDSSDVPQYSQNALTIAKEKNISLQTAIAIEALTQ
LSSTLPQPFLEASSQINSTSQIGDVSSSSIEENNVALSASSDAIQDLQEDLNHQQKNRHP
SLQEHPGQQMFPELHSQVQTPWEPLKKPAQIEAHYIPATKTLPDPFNKFTNSISTIKQMN
EVSAQKRNTASAEGNMPVFNAHQPVTSINDPMTELKQLLDSNNSNKHPLPLFRTPGLTVH
EDAGVKTQQNLSLPFSNLVAGVEFYGMQSEQQSSQSMHQKDMLQRSKHQKTQAALQQHLH
YKRNLFQMHSQKQNHLHDQQKWWSKHQPNLKRQKQKKPVHEKKKLQPIYKQRKETQLQKT
QNIQQQLFLLQLQQMQQKKLQQSLQHQSLPQQKQVFGFQQMEKIQNNYEIGEHEAQLLPQ
QHLLKEQELQRALQPTFEVSQQKQPDNSESSITQETPTFNRSVSKETYRSQPDSFLSNQN
IEKYPQSTQLTNSLSKYADEKDPHTNSISLPIQTQQNDVPAHSPHSFEEKIEELLKQFEA
EFESGSTSQQLQFTPQNNSASQGEPNENQTPSTDSQFSFRNQSSDSDQSNQILFSRKSPY
HEQHECKLTSTNNKTNSSLQDSTKCCNDTFLTGYSKHMKVESSGAITVLSTVYSGENIEG
SSEGTPTKSTPLTPSLSGFLESPLKYLDTPTKSLLDTPSKKAQMEFPSCDCVEQIIEKDE
GPYYTHLGSGPTVAAIRELMEERYGEKGKAVRIEKVIYTGKEGKSSQGCPIAKWIIRRAN
EEEKVLCLVRERAGHHCQNAVVIILILAWEGIPRAFGDKLYDELTETLTKYGNPTCRRCG
LNDDRTCACQGKDPETCGASFSFGCSWSMYFNGCKYARSKHPRKFRLLGDNPKEEDLLKE
RLQTLATEVAPIYKQLAPQAFKNQVTNEQIAPDCRLGKKEGKPFSGVTACMDFCAHAHKD
QHNMYNGCTVVCTLTKEDNRKIGMTPEDEQLHVLPLYKVSTTDEYGSEENQNEKIKAGAI
EVLTAFPREVRMLPEPVKSARQKKLEAKRAAEKQRNQAKKLLAGKLKQEDLQCSAAQNKD
VTLATATPQHHITTSIKIEPQDHYNSYKHSGNSVVESYTVLGSCRPSNSYSLGNAYPYHS
YYARPTPPSINNFHPRYSFSYGYYGYASDQLFPTSFLNYGRNDTRPGSFSGNSFEKKPDV
QELCANFNLALRSNRIDCSDQAAEMTPKQNHQPMFQGGSGLVSQTSLSTTSNQSHQTHQI
PEEVKRVPQNTNSVNRFIKQEPDDSVSYSQSCRGISMNVHAVNSTFSALQMPPNIAHQGK
SWDMFKPNGSLISAGTSGHEKPWGLFNPTDPANLINTNVHEKWNSTTSNRNATGLPATNM
QEKPWNLLTDRSAPPVQSANLQETMWDSFKTGETRSPPSISSNVNLKDKLWEPAKIQNNL
SMISGPSLQDKPWDLYKIGNSKPSISSINPHEKVWGENGTMLPSTNMEGKQWDLYKVNEN
KSVLQSADLQEQLWDPYCMNENMEDLPPENVKEEEEEVWSDSEHNFLDGNIGGVAVAPAH
GSILIECARRELHATTPLKKPNRCHPTRISLVFYQHKNLNQPNHGLALWEAKMKILAERA
KQRQEEAARLGLPLVNTKLLGKKRKWGSAPTADIEHDKKDYFPTRQAMTITTNTVITVSS
YAYTQVTGPYNRWI
NT seq 6525 nt   +upstreamnt  +downstreamnt
atgctcgactccacagaataccctaacagtacgttaacagataaagacgggcagtggata
aaagaagattttaatctggtggaaaaaccattggccatcagtagtgtgaaatcagggaaa
attaatcaactgaatggaaacttagtccacgcatctggaaattctaatgcaggatcgcta
agacagttcgtatttcactctattgtaaatcaaactgaaggcccggttctcctcaagccc
atcgggaagtcaaaagtattagttggggctgacgtccagaattcaaagataagaaataaa
tccgcaaagaagtccgtgttatcttcatctgctgctataacttctgttttccctaagaca
aaaaaggcaatgctgaagaaaacgaaaccggtcgttaacgcagataacagctccccctgt
ataaaggcaacatctgaagacggcttcgggagcggcgcaacaattgaagatcaccaactg
accgatgagtattctaagtctagctatgaggactgcgatgttgacaccatcgtgatgcca
tctaaactaaaaactccggtcttgagctcagtggatacacctgtttatcaaaagaagaaa
cgcaaacgctgtggggtatgtgatccttgcatgaagaaagataattgtggggaatgtagc
aattgcaagaatcgcaagactggacatcagatctgcaaacagaggaaatgcgaagaactt
aagaagaaacccgggttctttcatgaggtggggaacaaagacaatacaaaagctcagaga
aagaagcaaacactggctgaaaagacaggttcagaaaggagctcagtggatggcccccga
acagaccaaatggaagaggggtcaaccaaccatgttggtgaaagcaggttaagattagaa
atggcaccaagtctggtgaatggagtatgtagtcaagatggacatcccattgatgtagag
tcaagtgagtggatggataaccagagactccctgaacacaccaatggaaacaacaatcga
ggaacaactcaattactgaaccaagttaggaaccatatcaaggaagacctggcaactact
gaggatactgtcatcctggatgatgctagaaagttaagtgcactccctgaaacggcagta
agcataccttcatataattcaccagcacaaaactctcagcctttacacaggattaacttt
actgagaaatgtaagccagagattaataacagcagtgacacagtgaatatgaatgatgat
tgccctccaaatgatgatttgagcactttgaccactgcatggacccttgcaaaaaaatat
gggaagaaaccaccaaattgcaattgtgatgggccagaatgcccagattatctagaatgg
cttgagaaaaaaataaaagctgttcttaatgaggaacagaatgggacttcacaaatccct
gataaaatcagtgatatgcctgtggaaaatggtgcttcaacgaatcatacacctactttg
gaggaaccatccatttttgattcctctgatgttcctcaatattctcagaatgcattaacc
attgcaaaagagaaaaacataagtcttcagacagcaattgccattgaagcccttacacaa
ctgtcatcaacacttccacagccatttttagaagcttcatcacagatcaacagcacctct
caaattggtgatgtctcatctagttccattgaggagaacaatgttgcattgtctgcatct
tctgatgccattcaggacttgcaagaagacctcaatcatcagcaaaagaataggcatcct
tcgctacaagaacatcctggtcagcaaatgttcccagaattacactctcaagtgcaaact
ccgtgggaacctctgaagaaaccagcacaaattgaagctcactacattccagccacgaaa
acattaccggatccatttaacaaatttacaaattcaatatcaactataaaacaaatgaat
gaagtttctgctcagaagaggaatacagccagtgctgaaggaaacatgccagtgttcaat
gctcatcagccagttacttcaataaatgaccctatgacagagttaaagcagctattagat
agtaacaatagtaacaaacatcctctaccattatttagaacacctggcttaactgtgcat
gaagatgcaggcgtaaagacccaacaaaatttatcattgccattctccaacttggtagct
ggagttgaattttatggaatgcagtctgaacaacagtcatctcagtccatgcatcaaaaa
gatatgcttcaaagaagcaaacatcaaaaaacacaggcagcattacaacaacatctacac
tataaacgcaacctgtttcaaatgcacagtcaaaaacagaaccatctacatgaccagcaa
aaatggtggtcaaaacatcagccaaatctaaaaaggcagaaacaaaagaaaccagtacac
gaaaagaagaaattacaaccaatatataagcagcgtaaagaaacccagcttcaaaagaca
caaaatattcaacagcaactcttcttgcttcaacttcaacaaatgcaacaaaagaaattg
cagcaaagtctgcagcatcaatcattacctcaacagaaacaggtctttggattccagcaa
atggaaaaaatacagaataattatgaaataggggaacatgaagcacagttactgccacaa
cagcatcttcttaaggaacaggaattacagagagcacttcaaccaacttttgaagtttcc
cagcagaaacaaccagataacagtgagtcatcaattactcaggagactcccacctttaac
aggtcagtgtcaaaggaaacatacagatctcaaccagattctttcttatctaatcaaaac
attgaaaaatatccacaatcaactcaactgacgaatagcctttccaaatatgcagatgag
aaagatccacatactaattcaatctccttacctattcaaacacaacaaaatgatgtacca
gcacatagtcctcactcttttgaggaaaaaattgaggaactcttaaaacaatttgaagct
gaatttgaatcaggctctacatcacagcaactccaatttactcctcagaataactcagca
tctcagggagaaccaaatgaaaaccagacaccttccactgactctcagttttcatttcgc
aatcaatctagtgattcagaccagagtaatcaaattttgttttctcgaaaaagtccgtat
catgaacaacacgagtgcaaactgaccagtacaaacaacaaaaccaattccagtttacag
gatagtacaaaatgttgtaatgacacttttttgactggatactcaaaacacatgaaagtt
gaaagctctggtgctattacagtattgtcaacagtttattctggagaaaatatcgaggga
tcttcagaaggcactcctacaaaaagtacaccactcaccccttccctcagtggctttttg
gaatctcctttaaaatatttggataccccaactaaaagtttgctggataccccatcaaaa
aaagcccaaatggaatttccatcatgtgattgtgttgaacaaatcatagaaaaagatgaa
ggtccatactacacacatcttggttctggacctactgtggcagcaattcgagaactaatg
gaggaaagatatggggagaaagggaaagcagttagaattgagaaagtcatttacacaggg
aaagaaggaaaaagttcccagggttgtccaattgcaaaatggataataagaagagccaac
gaagaagaaaaggtcctctgccttgtacgtgagcgtgctggtcatcactgtcagaatgca
gttgttattattcttatacttgcatgggaaggtattcctcgagcttttggggacaagctg
tatgatgaactcacagagactttaacgaagtatgggaatcctacatgtcgccggtgtgga
ttgaatgatgaccgcacatgtgcatgtcagggaaaggatcctgagacctgtggtgcttcc
ttttcctttggctgttcttggagcatgtacttcaacggatgcaaatatgcccgcagcaag
catccacgcaagtttagacttctgggggacaaccctaaagaggaagatttacttaaagag
agattacaaactctagccacagaggttgcaccaatatacaagcagcttgcaccccaagcc
ttcaaaaatcaggttacaaatgaacaaatagcccccgactgcagacttggaaaaaaagaa
ggaaagccattttctggtgtaactgcatgtatggacttctgtgcccatgctcacaaagat
cagcataatatgtacaatggctgtactgtggtttgtacattaacgaaagaagacaatcgt
aagataggaatgaccccagaagacgaacaattgcacgtgcttccactgtacaaggtgtca
acaactgatgaatatggtagtgaagagaatcagaatgagaagattaaagctggagcaata
gaagtgcttacggcattccccagggaagtcagaatgctgcctgagccagttaaatcagca
cgtcaaaagaaactagaagcaaaaagagcagctgaaaaacagagaaaccaagcaaagaaa
cttctggctggaaaactaaagcaggaagatttgcagtgcagtgctgcacaaaacaaagat
gtcacattggcaactgcaacaccccaacatcacattacaacttcaatcaaaatagaacca
caagatcactataattcctacaaacacagtggaaattcagttgttgagagttacacagtg
cttggtagctgtagaccctccaactcttacagtctgggaaatgcctatccttatcattct
tactatgcaaggccaaccccgccttccattaacaattttcatcctagatattcattctct
tatggatattatggttatgcaagcgaccaattatttcctacatcattccttaactatggc
agaaacgacacaagaccagggagtttctcaggaaacagctttgagaagaagcctgatgta
caggagctgtgtgctaatttcaatcttgccctcagaagtaacaggattgactgctctgac
caggctgcagagatgacaccaaagcagaatcatcaacccatgttccaaggaggatcagga
ttagtttctcaaacatcattatctacaacatccaatcaatcacatcaaacacatcaaata
cctgaggaagtcaaaagagttccacaaaatacaaacagtgtcaatcgatttatcaagcaa
gagcctgatgactctgtttcctattcacagtcctgtcgtgggatatctatgaatgtccat
gcagtgaacagtaccttttctgctctacaaatgccgccaaacatagcccatcaaggaaaa
tcatgggatatgtttaaaccaaatggtagtttaatatcagctggaacatctggtcatgaa
aaaccatggggcttattcaatcctactgatcccgccaacttaattaacacaaatgttcat
gaaaaatggaattcaacaacatctaacaggaatgcaacaggattacctgcaacaaatatg
caagaaaagccatggaatttacttacagatagaagtgcaccaccagtgcaaagtgcaaat
ctccaggaaacaatgtgggattcatttaaaacaggtgaaaccagatcaccaccctcaatc
tcatctaatgtgaaccttaaagacaaattatgggaacctgcaaaaatacagaacaacttg
tcaatgatatcaggacctagtctacaagataaaccatgggatttgtacaaaataggtaac
agcaagccttcaatatccagcataaacccgcatgagaaagtgtggggtgaaaatggaacg
atgttgcccagcacaaatatggaaggcaagcagtgggatctttacaaagtaaatgaaaat
aagtcagtattacagagtgcagacctacaggaacaactatgggatccttactgcatgaat
gaaaacatggaagatttgcctcctgagaatgttaaagaggaagaagaggaagtgtggtct
gacagtgaacacaattttttggatgggaacattggtggagttgctgtggcaccagcccat
ggttctattttaattgaatgtgccagaagagagcttcatgccactactccattaaaaaaa
ccaaaccggtgtcaccccacgcggatatctcttgtgttttaccagcataagaacttaaat
cagccaaaccatggcttagctctctgggaagcaaagatgaaaattcttgcagaaagagca
aaacaaaggcaggaagaagcagcaagattaggcttgccactggtaaacaccaagcttctt
gggaaaaaacgcaagtggggcagtgcaccgactgcagatattgaacatgacaaaaaagac
tattttcccacacgtcaggctatgaccatcacaacaaacactgttatcactgtgtcttca
tatgcctatacccaggtaacaggaccctacaaccgctggatttga

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