Rhincodon typus (whale shark): 109929954
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Entry
109929954 CDS
T06055
Name
(RefSeq) frizzled-1-like isoform X1
KO
K02432
frizzled 1/7
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04150
mTOR signaling pathway
rtp04310
Wnt signaling pathway
rtp04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109929954
04150 mTOR signaling pathway
109929954
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
109929954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
rtp04030
]
109929954
G protein-coupled receptors [BR:
rtp04030
]
Frizzled / Smoothened family
109929954
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
109929954
NCBI-ProteinID:
XP_020385090
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All DBs
Position
2:48126976..48160291
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AA seq
566 aa
AA seq
DB search
MAVSNCFHLDLCKLASARWLFVLHLFLQGLGPVRPQGQYNSERGISIPDHGFCQPISIPL
CTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSPELKFFLCSMYAPVCTVLEQA
IPPCRSLCERARQGCEALMNKFGFQWPESLRCENFPVHGSIDLCVGQNNTEKGSPTLDPT
QSLPNTGTIHPRGSSGREQFICPRVLKVPSYLNYHFLGEKDCGAPCEPSRTNGLMYFSEQ
ELKFSRIWIGIWSVLCCASTLFTVLTYLVDMQRFSYPERPIIFLSGCYTMVATAYIAGFL
LEERVVCNERFAEDGYKTVAQGTKKEGCTILFMMLYFFSMASSIWWVILSLTWFLAAGMK
WGHEAIEANSQYFHLAAWAVPAIKTITILAVGQVDGDVLSGVCFVGLNNVDALRGFVLAP
LFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLEKLMVRIGIFSVLYTVPATIVIAC
YFYEQAFRQQWEKSWVSQACKSYAIPCPSGEQPHMRPDFTVYMIKYLMTLIVGITSGFWI
WSGKTLHSWRKFYTRLTNSKHGETTV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgagtaattgtttccatctggatctgtgcaaacttgcgagcgctcggtggctg
tttgtgctgcatctgtttctccaaggactgggacctgtgcggccacaggggcagtacaat
agcgagaggggcatctcaatcccggaccacggcttttgccagcccatctcgatccccctg
tgcacggacatcgcctacaaccagaccatcatgccgaacttgttggggcacacgaaccag
gaagatgccggcctggaggttcaccagttttacccgctggtgaaagtgcagtgctcgccc
gagctaaagtttttcctgtgttccatgtacgcgccggtgtgcacggtactggagcaggcg
atccccccgtgccgatcgctttgtgagcgggccaggcagggctgtgaggcgctcatgaac
aaattcggcttccagtggcccgagagcctgcgctgcgaaaactttcccgtccacggatct
attgacttgtgcgtggggcagaacaacaccgagaagggcagtccgaccctggatcccacc
cagtccttaccgaacaccgggaccatacacccccggggttcctcgggcagggagcagttc
atttgcccgcgggttctgaaagtgcccagttacctgaactaccacttcctgggggagaag
gactgcggggcgccctgcgagccctcccgcaccaacggcctgatgtatttcagtgagcag
gagctgaagttctcccggatttggatcgggatctggtcggtgctgtgctgcgcttccacc
ctgttcacggtgctgacctacctggtggacatgcagcggttcagctacccggagcggccc
atcatcttcctgtcgggctgctacaccatggtagctaccgcctacatcgcgggctttctg
ctggaggagagggtggtctgcaacgagaggttcgccgaggacggctacaagacggtggcg
cagggcaccaagaaggaaggctgcaccatcctgttcatgatgctctacttcttcagcatg
gccagctcgatctggtgggtgatcctgtcgctgacctggttcctggcggcgggaatgaag
tggggtcacgaggccatcgaggccaactcgcagtacttccacttggcggcctgggcggtg
ccggccatcaaaaccatcaccatcctggccgtgggccaggtggacggcgacgtgctgagc
ggggtctgcttcgtgggcctcaacaacgtggacgcgctgcgcggcttcgtgctggcgccg
ctcttcgtctacctgttcatcggcacctccttcctgctggctggcttcgtgtccctgttc
cgcatccgcaccatcatgaagcacgacggcaccaagaccgagaagctggagaagctgatg
gtgcgcatcggcatcttcagcgtcctgtacaccgtgcccgccaccatcgtcatcgcctgc
tacttctacgagcaggctttccgccagcagtgggagaaaagttgggtcagccaagcctgc
aaaagttacgctatcccctgcccctccggcgagcagccccacatgaggccggatttcacc
gtctacatgatcaaatacctcatgacacttatagtgggcatcacctcaggcttttggatc
tggtccggtaagactttacattcatggcgcaagttctacactagactcacaaacagtaag
cacggcgagacgacagtgtga
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