Rhincodon typus (whale shark): 109930012
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Entry
109930012 CDS
T06055
Name
(RefSeq) very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 isoform X2
KO
K10703
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:
4.2.1.134
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00062
Fatty acid elongation
rtp01040
Biosynthesis of unsaturated fatty acids
rtp01100
Metabolic pathways
rtp01212
Fatty acid metabolism
Module
rtp_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
109930012
01040 Biosynthesis of unsaturated fatty acids
109930012
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rtp01004
]
109930012
Enzymes [BR:
rtp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.134 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
109930012
Lipid biosynthesis proteins [BR:
rtp01004
]
Fatty acid synthase
Component type
109930012
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Gene cluster
GFIT
Motif
Pfam:
PTPLA
Motif
Other DBs
NCBI-GeneID:
109930012
NCBI-ProteinID:
XP_020385139
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Position
2:42778060..42831974
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AA seq
240 aa
AA seq
DB search
MAPSEEDGSMEEKETKKKPLSPFATAWLTFYNITMTAGWLVLVVAMIRFSYQKRTHKGLY
RSIQKTLKFFQTFALLEIIHCAVGIVRTSVLVTGVQVMSRIFMVWFVIHSIRPIQNEESV
VLFLVTWTVTEITRYSFYTFNLLNHLPYFIKWARYNFFIILYPIGVVGELLTIYGALPFV
KKSGMYSLRLPNKFNVSFDYYTCLIIVMIAYIPLFPQLYFHMLRQRRKVLHGEVIKEKED
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccagtgaggaggatggctcgatggaagagaaagaaaccaagaagaagcccctc
agcccatttgctaccgcttggctcacattctataacattaccatgacggctgggtggcta
gtactagttgtggctatgatccgattttcctatcagaaaagaacacacaaggggctatac
aggagcatacaaaagacactaaagtttttccagacgtttgcattgctagagattatccat
tgtgctgttgggatagtacgaacttcagtgcttgttactggggtccaagtcatgtccaga
attttcatggtgtggtttgttatccacagtataagaccgatacagaatgaggaaagtgtc
gttcttttcttggtcacatggacagtgacagagattacccgatattccttttacacattc
aatctgctcaaccatttgccttacttcattaaatgggccagatacaacttctttatcatc
ttgtatccaattggtgtcgttggtgaacttcttacaatttatggtgccctacctttcgta
aagaaatctggcatgtattctctgagacttccaaataagttcaatgtctcttttgactac
tacacttgtcttatcattgtaatgatagcatatataccactttttccacaactgtatttc
cacatgctacgtcaaaggaggaaggtgcttcatggagaggtgatcaaagaaaaagaggat
tag
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