Rhincodon typus (whale shark): 109936037
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Entry
109936037 CDS
T06055
Name
(RefSeq) gastrula zinc finger protein XlCGF71.1-like
KO
K09191
general transcription factor IIIA
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109936037
03021 Transcription machinery [BR:
rtp03021
]
109936037
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109936037
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
109936037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-met
C1_4
DUF6076
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
109936037
NCBI-ProteinID:
XP_048472801
LinkDB
All DBs
Position
35:complement(4575311..4586158)
Genome browser
AA seq
233 aa
AA seq
DB search
MHQRVHIGDKPFTCEVCDKSLLTLQYLRAHQRIHAAEKPFTCDGCDKSFYTLSHLRAHQH
VHTGEKPFRCEQCNKLFLSPSDLRKHQRIHTGEKPFTCEVCDRSFSSVSDLRKHERIHTG
EKPFRCLMCKNSFSTLLNLRVHQRIHTGEKPFKCKTCNKSFTQSTQLRVHQRIHTGERPF
TCDVCEKSFSHSSDLRKHERIHTREKPFQCEVCYKSFLTSLGFLRHKRIHTTE
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaacgtgttcacataggagataaaccatttacatgtgaggtgtgcgataaatca
ctcttgacattacaatacctccgtgcacaccaacgcattcatgcagcagagaaaccattc
acatgtgatgggtgtgacaaatcattctatacattatcacacctccgcgcacaccaacat
gttcacacaggggagaaaccattcaggtgtgagcagtgcaacaaattgttcttatcacca
tcagatctccgtaaacaccaacgtattcacactggggagaaaccattcacatgtgaggtg
tgtgacagatcattttcttcagtgtctgatctccgtaaacatgaacgcattcatacaggg
gagaaaccattcaggtgcttaatgtgtaagaattcgttctcaacattgttaaatctccgt
gtacaccaacgcattcacacaggggagaaaccattcaagtgtaagacatgcaacaaatca
tttacacagtcaacgcagctccgggtccatcagaggatacacacgggggagagaccattt
acgtgcgatgtttgtgagaaatcattctcacattcatcagatctccgcaaacatgaacgt
attcacacaagggagaaaccattccagtgtgaggtttgttacaagtcattcttaacatca
ttgggcttcctgcgacacaagagaatccacacaacggagtaa
DBGET
integrated database retrieval system
