KEGG   Rhizobium tropici: RTCIAT899_CH11335Help
Entry
RTCIAT899_CH11335 CDS       T02432                                 

Gene name
ddlB
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rtr  Rhizobium tropici
Pathway
rtr00473  D-Alanine metabolism
rtr00550  Peptidoglycan biosynthesis
rtr01100  Metabolic pathways
rtr01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rtr00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    RTCIAT899_CH11335 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RTCIAT899_CH11335 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    RTCIAT899_CH11335 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rtr01011]
    RTCIAT899_CH11335 (ddlB)
Enzymes [BR:rtr01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     RTCIAT899_CH11335 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:rtr01011]
 Precursor biosynthesis
  Amino acid ligase
   RTCIAT899_CH11335 (ddlB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3 CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID: AGB71648
UniProt: L0LJU0
LinkDB All DBs
Position
complement(2290429..2291355)
Genome map
AA seq 308 aa AA seqDB search
MSGKHVAVLLGGFSSERPVSLSSGKACADALEAEGFQVTRVDVDHDVASRLAELKSDVVF
NALHGPFGEDGTIQGILEYLQIPYTHSGVLASALAMDKSRAKTVAAAAGVPVASSIVMDR
FAIVGEHPMKPPYVVKPVREGSSFGVVIVKEDQAHPPQIVTSAEWRYGDEVLVERYIYGR
ELTCGVMDGKVLGVTEIVPLGHSFYDYDAKYAKGGSKHVLPAEISPNLYQKIQTLSLRAH
EAIGCRGVSRSDFRFDDRFSEEGELVWLEINTQPGMTPTSLVPEMAAHAGYSFGEFLRWM
VEDASCLR
NT seq 927 nt NT seq  +upstreamnt  +downstreamnt
atgagtggcaagcatgtggctgtccttttgggcggattttcctcggagaggccggtcagc
ctttcctcgggaaaggcatgcgccgatgccctcgaagccgaaggctttcaggttacccgt
gtcgatgtcgatcatgacgttgccagtcggttagctgagttgaagtccgatgtggtcttc
aatgcattgcatggtcctttcggtgaagacggtaccattcagggcattctggaatatctg
cagattccctatacgcattccggcgtgcttgcctcagcgcttgcgatggataagtcgcgc
gcgaagactgtcgccgctgctgcgggtgtcccggtcgcgagttcgatcgtcatggatcgt
tttgctattgttggcgagcacccgatgaagccgccctatgtcgtcaagcctgtgcgtgaa
ggttcgagcttcggtgtcgttatcgtcaaggaagatcaggcgcatccgccacagatcgtt
acttctgccgaatggcgttatggcgatgaggttctggtcgagcgttatatctacgggcgc
gaactgacctgcggcgtcatggacggcaaggttcttggtgtgactgaaatcgtgccgctc
ggccacagcttctatgattatgacgccaagtacgccaagggtggctcaaaacatgtcttg
ccggcggaaatttcaccgaatctttaccaaaagatacaaacattatcgttaagggcgcat
gaagctatcggctgccgcggcgttagtcgatctgacttccgttttgacgatcgcttttcc
gaagagggcgaacttgtctggttggagatcaacacccagcccggcatgactcctacctcc
ctggtgcctgaaatggccgctcatgccggctactcttttggtgaatttctccggtggatg
gtggaggacgcgtcttgtttgcgctga

DBGET integrated database retrieval system