Rhizobium tropici: RTCIAT899_PC03335
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Entry
RTCIAT899_PC03335 CDS
T02432
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
rtr
Rhizobium tropici
Pathway
rtr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RTCIAT899_PC03335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtr02000
]
RTCIAT899_PC03335
Transporters [BR:
rtr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RTCIAT899_PC03335
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_16
nSTAND1
AAA_29
DUF87
AAA_25
Sigma54_activat
FtsK_SpoIIIE
AAA_33
ABC_ATPase
NB-ARC
NACHT
nSTAND3
AAA_23
RsgA_GTPase
PRK
AAA
AIG1
DUF3987
Motif
Other DBs
NCBI-ProteinID:
AGB74467
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Position
pRtrCIAT899c:715831..717570
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AA seq
579 aa
AA seq
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MTPLLSVSDLCVGFGRNPETKPIVRGVSFDLDAGETLAIVGESGSGKSVTALSINRLVDF
GGGRITGGSIRLKRADNSILDLTKASEAELTKIRGAEIGMIFQEPMTSLNPVLTIGTQIE
ESFRLHRGLTGGQAKAAAKDALDRVRIPDAERRLTYCPNQLSGGMLQRVMIATALACNPR
LLIADEPTTALDVTVQAQIMALLAELKHETGMSMIFITHDIGLVAGIADKVMVMQAGEAV
EQGELDQVLDHPAHPYTRHLLHSVPHFSSGQAARTDFQRDEPALKSVLKVDGLTVRFPVK
GSFLRRSTDAVHAVEGVGFDLMPGETLAIVGESGSGKSTTARAILGLVKSIRGTFTTNGG
KAADRTSAVQMVFQNPYASLNPRLRIDSILAEPVIASGARVSAEMRERMLMLLKRVGLPE
NALERYPHEFSGGQRQRLCIARALMLNPSVLVLDEAVSALDVSVQAQVLELLIELQREYG
LAYLFISHDMAVVERIAHRIAVIYAGQIVEIGDAASVLSEPKHSYTRRLIAAVPTVARRK
ENFTLDTRQVPSLVRPLGFEPALPEWRRFAPDHIALAEA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgcttctttccgtctctgatctctgcgtcggcttcggacgcaaccccgagacc
aagcccattgttcgcggtgtcagcttcgatctcgatgccggcgagacgctggcgatcgtc
ggcgagagtggttccggcaagtcggtaacagcattgtcaatcaatcgcctcgtcgatttc
ggcggtggccggatcaccggcggctcgatccggctcaagcgtgccgacaacagcatcctc
gatctcaccaaggcgagcgaagcagaactgacgaagatccgtggtgccgagatcggcatg
atctttcaggagccgatgacctcgctcaacccggttctaacgattgggacgcagatcgag
gaatccttccggctgcatcgcggcctgaccggcggccaggcaaaggcggcggccaaggac
gcgctggatcgcgtgcgcattccagatgccgagcggcgacttacctattgcccgaaccag
ctttccggcggcatgctgcagcgtgtgatgatcgcaacggcgcttgcctgcaatccgcgt
ctattgattgccgatgagccgacgacggcgctcgatgtcactgtgcaggcgcagatcatg
gcgctgcttgccgaattgaagcacgagaccggcatgtcgatgatcttcatcacccacgat
atcgggcttgtcgccggcatcgccgacaaggtgatggtgatgcaggccggcgaggcggtg
gagcagggcgaactcgatcaggttctcgatcatcccgcgcatccctatacccggcatctg
ctgcattcggtcccgcatttttcatcggggcaggcggcacgcaccgattttcaacgcgat
gagccagcactaaaatcggttttgaaggtggatggcttgacggttcgctttccggtcaag
gggagtttcctgcgtcgatcgaccgatgcggttcacgccgtcgaaggcgtcggtttcgac
ctgatgcccggcgagacgctggcgatcgtcggcgaaagcggctcgggcaaatccaccacc
gcccgggcgatcctcggattggtgaagtcgatccgcggcacgtttacgaccaatggcggc
aaagccgccgatcgcaccagcgcggtgcagatggtcttccagaacccctatgcctcgctc
aatccgagactccgcatcgatagcatccttgccgaaccggtgattgcatcgggtgcgcgc
gtttcggccgagatgcgcgaacgcatgctaatgctgctgaagcgcgtgggattgccggaa
aatgctctggagcgctatccgcacgaattttccggcggccagcgtcagcggctttgcatc
gcgcgcgcattgatgctcaatccgtccgtgctggtgctggacgaagcggtgtccgcgctc
gacgtctccgttcaggcgcaggtcctggaattgctgatcgaactgcagcgcgaatatggg
ctcgcctatctcttcatctcgcatgacatggcggtcgtggagcggatcgcccatcgcatc
gcggtgatctatgccgggcagatcgtcgagatcggcgatgccgcctcggtcttgtcggag
cccaagcattcctataccaggcggctgatcgcggcggttccgacggttgcgcggcgcaag
gaaaactttacgctcgatacccgccaggttccgtccctggtgcgtcctttgggcttcgag
cccgcccttcctgagtggcgccgctttgcgccggatcacatcgcgctggcggaagcttga
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