Rhizobium tropici: RTCIAT899_PC04150
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Entry
RTCIAT899_PC04150 CDS
T02432
Name
(GenBank) putative oligopeptide ABC transporter, substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rtr
Rhizobium tropici
Pathway
rtr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RTCIAT899_PC04150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtr02000
]
RTCIAT899_PC04150
Transporters [BR:
rtr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RTCIAT899_PC04150
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AGB74627
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All DBs
Position
pRtrCIAT899c:880007..881674
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AA seq
555 aa
AA seq
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MRNLFQRTSLAAAVLGASLAFGAGMASAESVLTMHIEEQTSWVSNFNPFDLAGRRQSTMD
FIYEPLVIFNANDGGKPVWRLATSYKFSDDLMSITYELRPGVKWSDGQPLTSADVKYTID
LMLKNPAVDTVGAGQTVASVEAPSPTEVTIKLKAVNSEFPESLADLAVVPEHIWKDVADP
VAFKNEKPVGSGPMTEVRRFTPQVYEQCRNPNYWDAASLHVDCLRLPQISGNDQMLALLP
EGTVDWIGSFLPQIDKTFVALDPQHNGYWQPPAETVAFEMNFKSSNIGNFEAFKDLNFRH
AFSLAMDRKSMVDIAGFGYPVVNLHASGLPPRFDSWRNKAAEGDKDAFMGFDTDKANKIL
DDAGYKKGADGFRTTPSGKPITFAVIVPNGWTDWIDAVQIAVEGLRAAGINASVATPEYE
QWRKQLLDGSFDVVMNSRADSATPFQGYYQSLSTAYAGKLTVAAPRYSNPKLDALFDQYL
KSSSDDDHKKIFNDIQVLIADDFPVVPVFNGPTWYQYSSKRFTGWVTDKDPVMNPENHDN
NRMRLMHLLRLKPVQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcaatctatttcagcggacatcactggcagcggcggtgcttggcgcttcgctggca
ttcggtgcaggcatggcatccgcggaatccgtgctgacgatgcacatcgaggagcagacc
agctgggtcagcaacttcaatccattcgatctggccggtcgtcgccagagcacgatggat
ttcatctacgagcccttggtcatcttcaacgccaatgacggcggcaagccggtctggcgt
ttggcgaccagctacaagttctccgacgatctgatgtcgatcacgtacgaactgcgtccc
ggcgtgaaatggtcggatggccagccgctgacctcggccgacgtgaaatacacgatcgac
ctgatgctgaagaacccggccgtcgataccgtcggtgccggtcaaacagtcgcatcggtc
gaggcaccgtcgccgacagaggtgacgatcaagctcaaggccgtgaattccgaattcccg
gaatcgctcgccgatctcgccgtcgtgcccgagcatatctggaaggacgtggccgatccg
gtcgccttcaagaacgagaagcccgtcggctctggcccgatgaccgaggttcgccgtttc
accccgcaggtttacgagcagtgccgcaatccgaactactgggatgccgcatcgcttcat
gtcgattgcctgcgcctgccgcagatctcgggcaacgaccagatgctggcgctgctgccg
gaaggaaccgtcgattggatcggctcgttcctgccgcagatcgacaagaccttcgtcgcg
ctcgacccgcagcacaatggttactggcagccgccggcggaaaccgttgccttcgagatg
aacttcaaatcttcgaatatcggtaatttcgaggcattcaaggatctcaatttccgccat
gcgttcagcctggcgatggaccgcaagtcgatggtcgatattgccggcttcggctatccg
gtcgtcaacctgcacgccagcggcctgccaccacgctttgacagctggcgcaacaaggct
gccgaaggcgacaaggacgccttcatgggctttgataccgacaaggccaacaagatcctc
gacgatgccggctacaagaagggcgccgacggcttccgcacgacgccgagcggcaagccg
atcaccttcgcggtcatcgtgccgaacggttggacggactggatcgatgccgtgcagatc
gccgtcgaaggacttcgcgccgcgggcatcaacgcctcagttgccacccccgaatacgag
cagtggcgcaagcaacttctcgatggcagcttcgatgtggtcatgaattcgcgcgccgac
agtgccaccccattccagggctattatcagagcctgtcgacggcctatgccggcaagctc
accgtcgccgcgccacgctactccaacccgaagctcgatgcgctcttcgatcagtatctg
aagtcgtcttccgatgatgatcacaagaagatcttcaacgatatccaggttctgatcgca
gacgatttcccggtcgttcccgtcttcaacggcccgacctggtatcagtattccagcaag
cgtttcaccggttgggtcacggacaaggatccggtgatgaatccggaaaaccacgataac
aaccgcatgcgtctcatgcatcttctgcgtctgaagccggtccaataa
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