Rickettsia typhi Wilmington: RT0251
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Entry
RT0251 CDS
T00193
Symbol
xthA1
Name
(GenBank) E.coli exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rty
Rickettsia typhi Wilmington
Pathway
rty03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RT0251 (xthA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rty03400
]
RT0251 (xthA1)
Enzymes [BR:
rty01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RT0251 (xthA1)
DNA repair and recombination proteins [BR:
rty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RT0251 (xthA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AAU03732
UniProt:
Q68XB0
LinkDB
All DBs
Position
318271..319056
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AA seq
261 aa
AA seq
DB search
MKIVTWNINSLRLRIELLRKLAYEYQPDIILLQETKVANSLFPLEVIKNIGYEHVIYSGQ
KSYNGVAIISKLPLNNVFSLELYNDDKRHIAAIVHGLEIHNFYVPAGGDIPDIEVNLKFK
HKLEYVRLMKEWFTTNRTKNDKIIIVGDLNIAPHEHDVWSSKQMRNVISHTDIERSLLVE
LQNSLGFIDSNRYFISLDKKCYTWWSYRNVDWKKSNRGRRLDHIWVSDNLKDALFSMNVL
SEARDWLRPSDHVPYFVTLHF
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagttacttggaatattaattcattgcgtctacgtattgagttattaaggaaa
ttagcatatgaatatcagccagatattattttacttcaagaaacaaaagtagctaattca
ttatttccacttgaagttattaaaaatataggatatgaacatgtaatatattcagggcag
aaatcatataatggtgttgctattatttcaaaattgcctttgaataatgttttttcactg
gaattatataatgacgataaaaggcatatagcagctatagttcatggtttagagatacat
aatttttacgttccagcaggtggtgacatacctgatatagaagtaaacttaaaatttaaa
cataagctcgaatatgtaaggttaatgaaggaatggtttactactaaccgtactaaaaat
gacaaaattattattgttggggatttaaatattgctccacatgaacatgatgtatggtct
agtaagcagatgcgaaatgttattagtcataccgatattgaacgctcattattggtagag
ctacaaaactcgttaggttttattgacagtaatagatatttcatatcacttgacaaaaaa
tgttatacttggtggagttatagaaatgtagattggaaaaaatctaacagaggtagaaga
ctagaccatatttgggttagtgataatttaaaagatgcattattttctatgaatgtacta
tcagaagcacgagattggttgcggccttcggatcatgttccgtattttgtaactttgcat
ttttag
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integrated database retrieval system
