Rubrobacter tropicus: GBA63_03315
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Entry
GBA63_03315 CDS
T06510
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rub
Rubrobacter tropicus
Pathway
rub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GBA63_03315 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rub03400
]
GBA63_03315 (mutM)
Enzymes [BR:
rub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GBA63_03315 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GBA63_03315 (mutM)
DNA repair and recombination proteins [BR:
rub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GBA63_03315 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QIN81774
UniProt:
A0A6G8Q5K8
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All DBs
Position
711639..712499
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AA seq
286 aa
AA seq
DB search
MPELPEVETIKRDLGELVVGARVEDVEIPSPVLVEHPSREDFVRRLRGARAAGARRRAKH
LIVDLDSGDALVLQLKIGGQLLLVPPVKEPATALMLVLRLEGGRSLFLRDETGFTRARLL
DAGELERRFEDLGPEPLGDEFRPGYLREKLGGRRARIKGLLLDQKVVAGVGNIYVDEALF
DARIHPTRKANTLTEDEWTRLQAAVKENLRAGIEHRGTTFSLYRDVLGRKGHHQDHLKVF
VQAGKPCPGGCGGKVVKEKVGGRATFLCPACQPEDGSGEAVRLEFG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgcccgaagtagagacgataaagagggaccttggcgagctcgtcgtaggg
gcgagggtggaggacgttgagatcccgtcccccgttctcgtggagcatccttcgagagag
gacttcgtccggcggctgaggggcgcgcgggcagccggcgcgcgccggcgtgccaagcac
ctcatcgtcgacctcgactcgggggacgcgctcgtcctgcaactgaagatcggcggtcaa
ctcctgctagttcccccggtgaaggaaccggcgacggccctcatgctcgtgctgcgcctg
gaggggggccggagcctctttttgcgggacgagaccggctttaccagggcgcggctcctg
gacgccggtgagttggagcgccgcttcgaagacctcggccccgagcctttgggcgacgag
ttccggcccggctacctgcgggagaagctcggcgggcgcagggcgcgcatcaagggtctg
ctcctcgaccagaaggtcgtggccggcgtcggcaacatctacgtcgacgaggccctcttc
gacgcccggatacaccccacgcgcaaggccaacacgctcacggaagacgaatggacgagg
ctccaggccgccgtaaaggagaacctcagggccggcatagagcaccggggcacgaccttc
agcctctacagggacgtcctcgggcgcaagggacaccaccaggaccacctcaaggtcttt
gtacaggcgggcaagccttgccccggcggctgcggggggaaggtcgtcaaggagaaggtc
ggggggagggcgacgttcctgtgtcccgcctgccagcccgaagatggctccggggaagcg
gtacgattagaattcggttag
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