KEGG   Rubrobacter tropicus: GBA63_08535
Entry
GBA63_08535       CDS       T06510                                 
Name
(GenBank) DNA topoisomerase IB
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
rub  Rubrobacter tropicus
Brite
KEGG Orthology (KO) [BR:rub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rub03032]
    GBA63_08535
   03400 DNA repair and recombination proteins [BR:rub03400]
    GBA63_08535
Enzymes [BR:rub01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     GBA63_08535
DNA replication proteins [BR:rub03032]
 Prokaryotic type
  DNA Topoisomerases
   GBA63_08535
DNA repair and recombination proteins [BR:rub03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      GBA63_08535
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: QIN82685
UniProt: A0A6G8Q871
LinkDB
Position
1752490..1753524
AA seq 344 aa
MARHVLFETGIRRLGSKEDGFFYRYPGTDEVVREERVLARIEELKVPPAWEEARIARSPS
AKVQAVGYDSAGRVQYRYHDKYRERKEREKFGRILEFAGRLPEMRRVTSNHLRHKTLDRE
KVLACMTRMMNAAYFRVGDERYAKNNKTYGIATLRRKHLKIEGDTVIFEYTGKWGQEQRK
AVTDARIRRVVEECRDLPGYEVFKYVDEDGDVRDVKSRDLNAYVKEVVGPEFTPKDFRTW
AGTLIAANRLAELGEAENHKAAQKNVLAAVDDVAHRLGNTRDIARASYISPRVIDHYLEG
SVVAYYGERLEEIIAAEQGGLTEEEKALLDLLNRKLRRELGEAA
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggctaggcacgttttgttcgagacggggattcggcggctcgggtcgaaggaggacggc
ttcttctaccgctatccggggacggatgaagtggtgcgcgaggagcgggtcctggcgcgg
atagaagaactgaaggtgccgcccgcctgggaggaggcgcggatagcgaggagcccttcg
gccaaggtgcaggccgtcggatacgattctgccggacgggtgcagtacaggtatcacgac
aagtacagggagcgcaaggagcgggagaagttcgggcgcatcctcgagttcgcgggcagg
cttcccgagatgcggcgcgtcacgagcaaccatctgcggcacaagacgctggatcgcgag
aaggtgctcgcgtgcatgacgcgcatgatgaacgcggcttacttcagggtcggcgatgag
cgctacgcgaagaacaacaagacctacggtatcgcaacgctcaggcgaaagcacctgaag
atcgagggcgacaccgtgatcttcgagtacaccggcaagtgggggcaagagcagcgcaag
gccgtcacggacgccaggatcaggcgcgtcgtcgaggagtgccgggacctgccgggctac
gaggtcttcaagtacgtcgacgaagacggggatgtgcgcgacgtgaagagccgcgacctc
aacgcctacgtcaaagaggtggtcggccccgagtttacgcccaaggacttccgcacctgg
gccgggaccctgatcgccgccaaccgcctcgccgagctgggcgaggccgaaaaccacaag
gccgcccagaagaacgtgctggccgccgtggacgacgtggcccacaggctgggcaacacc
agggacatagcgcgggcctcctacatcagccccagggtcatagaccactacctcgaaggc
tccgtggtagcctattacggcgagcggctcgaggagatcatcgccgcggagcagggcggc
ctgaccgaggaggaaaaggcgctcctggacctgctgaacaggaaactccgccgcgaactc
ggagaggccgcctga

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