Rubrobacter tropicus: GBA63_08535
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Entry
GBA63_08535 CDS
T06510
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rub
Rubrobacter tropicus
Brite
KEGG Orthology (KO) [BR:
rub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rub03032
]
GBA63_08535
03400 DNA repair and recombination proteins [BR:
rub03400
]
GBA63_08535
Enzymes [BR:
rub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GBA63_08535
DNA replication proteins [BR:
rub03032
]
Prokaryotic type
DNA Topoisomerases
GBA63_08535
DNA repair and recombination proteins [BR:
rub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GBA63_08535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QIN82685
UniProt:
A0A6G8Q871
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All DBs
Position
1752490..1753524
Genome browser
AA seq
344 aa
AA seq
DB search
MARHVLFETGIRRLGSKEDGFFYRYPGTDEVVREERVLARIEELKVPPAWEEARIARSPS
AKVQAVGYDSAGRVQYRYHDKYRERKEREKFGRILEFAGRLPEMRRVTSNHLRHKTLDRE
KVLACMTRMMNAAYFRVGDERYAKNNKTYGIATLRRKHLKIEGDTVIFEYTGKWGQEQRK
AVTDARIRRVVEECRDLPGYEVFKYVDEDGDVRDVKSRDLNAYVKEVVGPEFTPKDFRTW
AGTLIAANRLAELGEAENHKAAQKNVLAAVDDVAHRLGNTRDIARASYISPRVIDHYLEG
SVVAYYGERLEEIIAAEQGGLTEEEKALLDLLNRKLRRELGEAA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggctaggcacgttttgttcgagacggggattcggcggctcgggtcgaaggaggacggc
ttcttctaccgctatccggggacggatgaagtggtgcgcgaggagcgggtcctggcgcgg
atagaagaactgaaggtgccgcccgcctgggaggaggcgcggatagcgaggagcccttcg
gccaaggtgcaggccgtcggatacgattctgccggacgggtgcagtacaggtatcacgac
aagtacagggagcgcaaggagcgggagaagttcgggcgcatcctcgagttcgcgggcagg
cttcccgagatgcggcgcgtcacgagcaaccatctgcggcacaagacgctggatcgcgag
aaggtgctcgcgtgcatgacgcgcatgatgaacgcggcttacttcagggtcggcgatgag
cgctacgcgaagaacaacaagacctacggtatcgcaacgctcaggcgaaagcacctgaag
atcgagggcgacaccgtgatcttcgagtacaccggcaagtgggggcaagagcagcgcaag
gccgtcacggacgccaggatcaggcgcgtcgtcgaggagtgccgggacctgccgggctac
gaggtcttcaagtacgtcgacgaagacggggatgtgcgcgacgtgaagagccgcgacctc
aacgcctacgtcaaagaggtggtcggccccgagtttacgcccaaggacttccgcacctgg
gccgggaccctgatcgccgccaaccgcctcgccgagctgggcgaggccgaaaaccacaag
gccgcccagaagaacgtgctggccgccgtggacgacgtggcccacaggctgggcaacacc
agggacatagcgcgggcctcctacatcagccccagggtcatagaccactacctcgaaggc
tccgtggtagcctattacggcgagcggctcgaggagatcatcgccgcggagcagggcggc
ctgaccgaggaggaaaaggcgctcctggacctgctgaacaggaaactccgccgcgaactc
ggagaggccgcctga
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