Rufibacter sp. DG15C: TH61_03660
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Entry
TH61_03660 CDS
T04326
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rud
Rufibacter sp. DG15C
Pathway
rud03030
DNA replication
rud03430
Mismatch repair
rud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TH61_03660
03430 Mismatch repair
TH61_03660
03440 Homologous recombination
TH61_03660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rud03032
]
TH61_03660
03400 DNA repair and recombination proteins [BR:
rud03400
]
TH61_03660
Enzymes [BR:
rud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TH61_03660
DNA replication proteins [BR:
rud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TH61_03660
DNA repair and recombination proteins [BR:
rud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TH61_03660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
DNA_pol3_gamma3
RuvB_N
AAA_5
Rad17
AAA_14
DNA_pol3_delta_C
AAA_30
AAA_7
AAA_2
AAA_24
DNA_pol3_delta
AAA_18
Mg_chelatase
AAA_16
AAA_19
nSTAND3
AAA_assoc_2
RNA_helicase
PIF1
AAA_33
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
AMM50461
UniProt:
A0A127AZD1
LinkDB
All DBs
Position
complement(879651..881582)
Genome browser
AA seq
643 aa
AA seq
DB search
MENFVVSARKYRPATFDSVVGQHHITTTLKNAISSNHLAQAFLFCGPRGVGKTTCARILA
KTINCENITPETEACNVCDSCKSFNTSSSFNIHELDAASNNSVDDIRSLVEQVRYVPQTG
KYKIYIIDEVHMLSNQAFNAFLKTLEEPPSYAIFILATTERHKIIPTILSRCQIFDFNRI
RIEDMVQHLGSIAGKENIEAEEDALHLISQKADGALRDALSIFDQMVTFSGNHLTYKATV
QNLHILDYDYYFRLTDYLLTQNLSGTLLLYDEILKNGFDSHNFILGIGDHFRSLLVCKDQ
VTVQLLEVSENIKSRYAQQAQEASLSFLLSGLNLVGTCDQNFKAAKNQRLHVELLLMKLA
HLPQALQLASDVSLTGDVKKKTNGSSSVAAPAAPATAIPAPAPVSAPVAVASAPSVSAGF
EKNSPETHHNTAPSDMDAGEDPIFDTYPEEAPSPVPSMIAPAAPVTTPAPLRAPIASPLA
GRKMSKLPSLKNIEEKVAASAAPAIDVLEEETEAYVPGSLPAINEEKLRRLWQAYVDRVK
QTDRTLELTIMNRDWSFDVERAEVRLTVENDVQVAEFNSFKPELLLYLRQSLGHNRLQVN
IEVAQQENIGRNLYTSQDRFNYLSELYPGLLELKNRLGLDTDF
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggagaattttgttgtatcggctagaaaataccgtcctgctacctttgacagtgtagtg
ggccagcaccatattaccactaccttaaagaacgcgattagcagtaaccatctggcgcag
gccttcttgttctgcggtccaagaggggtgggcaagactacgtgcgcgcgtattctggcc
aagaccatcaactgtgagaacatcacgccagagactgaggcctgcaacgtctgtgactcc
tgcaaaagttttaacaccagcagttcgttcaacatccatgagctggatgcggcgtccaac
aactccgtagatgatattagaagtctggtggagcaggtgcgctatgtgccgcagacgggc
aagtacaaaatctacatcatagatgaggtgcacatgctctccaaccaagccttcaacgcg
tttttgaagaccctggaagagccaccgtcctacgccattttcattctggccactacggag
cgccataagatcatccctaccattctgtcccgctgtcagatttttgacttcaaccgcatt
cgcattgaagacatggtccagcatttgggcagcattgcgggcaaagagaacattgaagcc
gaagaagacgccctgcacctgatttcgcagaaggcagacggcgccctgcgcgatgcgctt
tccatttttgaccagatggtgaccttctcgggtaatcatttgacctataaggccacggtg
cagaacctgcacattctggactatgactattacttcaggctgaccgactacctgctcacg
cagaacctgagcggcaccttgttactgtatgacgagatcttgaaaaacggcttcgattcc
cataactttatcttgggtattggcgaccacttcagaagcctgttggtgtgcaaagaccag
gtgacggtacaattgctggaggtttctgagaacattaagtcccggtacgcgcaacaggcg
caggaagccagtttgagcttcttactgtcaggcttgaacctagtgggtacctgtgaccag
aactttaaagccgccaagaaccagcgcctgcacgtggagctgttgctcatgaaactggcg
catttgccgcaagccttgcaactggcctcagacgtctctcttaccggggacgtcaaaaaa
aaaactaatggaagttccagcgtagccgcacctgcggctcctgcaactgctattcccgcc
ccagctcctgtttctgctccggtagcagttgcctcagcaccctcggtttctgctggtttt
gagaaaaacagcccagaaacgcaccacaatacggcaccctcagacatggatgctggcgag
gaccccatctttgacacgtatccagaagaggcgccttcgccggtgccttctatgatagcg
cccgctgcgccggtgactacgcccgctcccttgcgcgcgcccatcgcttcgccgctggcc
gggcgcaagatgtccaaactgcccagcctcaagaacatagaggaaaaggtggctgcttcg
gcagccccggccatagacgtgctggaagaagaaaccgaggcctacgtgcccggctccctt
cctgccattaatgaagagaagctgagacggttgtggcaagcctacgtggaccgcgtcaag
caaacggaccgtacgctggagttaaccatcatgaaccgcgactggtcctttgacgtggaa
cgcgctgaggtgcgtctgaccgtggagaatgacgtgcaggtagccgagttcaactctttc
aagcctgaactactcttgtatttgcgccaaagcttgggccacaaccgcctgcaggtgaac
attgaagtagcccagcaggaaaatatcggccgcaatctctacacctcacaagaccgtttc
aattacttgtcagagttgtatccaggcttgttagagctgaaaaaccgccttggactggac
acagatttttaa
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