Salicibibacter kimchii: DT065_04220
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Entry
DT065_04220 CDS
T05571
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rue
Salicibibacter kimchii
Pathway
rue03420
Nucleotide excision repair
rue03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DT065_04220
03430 Mismatch repair
DT065_04220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rue03400
]
DT065_04220
Enzymes [BR:
rue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DT065_04220
DNA repair and recombination proteins [BR:
rue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DT065_04220
MMR (mismatch excision repair)
Other MMR factors
DT065_04220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Viral_helicase1
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Mob1_phocein
Motif
Other DBs
NCBI-ProteinID:
AXF55303
UniProt:
A0A345BWH2
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All DBs
Position
complement(824168..825286)
Genome browser
AA seq
372 aa
AA seq
DB search
MTHNKLTIAAAGAGKTTHLIEQALLHKDEPILITTYTQANEAQIRRKIIKKNKCIPQNIK
IQTWFSLLLQHGVRPYQSYLFDEKIKGMLLVNKKSGFKYYNKKKDAPVYYKEKEVKKHYF
TNDHKIYSDKVSKFVVKCNMESNGEVIKRLSRIFTHIYVDEVQDLAGYDLEIIKLLLKSN
SKIHLVGDPRQVTYLTHHENKHNKYREGKIKDFIENECGSICDIDEKTLNSSHRNNQEIC
DFASKLYPEFPKSRSNQNIEANHNGVFLVKNKDLEKYLELYEPVQLRENVKTKVNNNYKV
VNFGESKGLTYDRVLIYPTKPYIDWLKNNDTELKSMSRSKFYVAITRAKHSVAIVYDFDE
TTNIEGVEKFED
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgactcataacaaactgacaattgcggctgctggcgcaggtaaaacgacgcatcttata
gaacaagcacttttacataaagatgaaccaatattaataactacttatacacaagcaaac
gaggcacaaatacgtagaaaaatcattaagaaaaataagtgcatacctcaaaatataaaa
atccaaacatggttttccttattattacaacatggggttagaccgtatcaaagctattta
tttgatgagaaaataaaaggtatgttgcttgtaaataaaaagtcgggatttaagtattat
aataagaaaaaagatgcccctgtttattataaagaaaaagaagtaaaaaaacattatttc
actaatgaccacaaaatttattctgacaaagtatcaaaatttgttgttaagtgtaatatg
gaaagtaacggggaggtaataaaaaggttgagcaggatctttacccacatatatgttgat
gaagtacaggatcttgcaggatatgatttagaaattatcaagttacttctaaaaagcaat
tctaagattcacctagttggagatcctcgtcaagtaacgtatcttactcatcatgagaat
aagcataataaatatagagaggggaaaataaaagattttatcgaaaatgaatgtggaagt
atttgtgatattgatgagaaaacattaaattcttctcatagaaataatcaagaaatatgt
gactttgcttcaaagctgtatccagaattcccaaaaagtagatctaatcaaaatatagaa
gccaaccacaacggggtattcttagttaaaaataaggatttggaaaagtatttagaacta
tacgaaccagtgcaactaagagagaacgtcaaaacgaaagtgaataacaattataaggta
gttaatttcggagagtctaaagggttaacctacgatagagttctaatataccctacaaaa
ccctatattgattggttgaaaaacaacgacacagaattaaagtcaatgagtcgatctaaa
ttttacgttgctataacaagagctaaacatagcgtagctatcgtttatgactttgatgaa
acgacaaatattgagggtgttgaaaaatttgaggattag
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