Ruminococcus sp. SR1/5: CK1_28210
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Entry
CK1_28210 CDS
T02601
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum03030
DNA replication
rum03430
Mismatch repair
rum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CK1_28210
03430 Mismatch repair
CK1_28210
03440 Homologous recombination
CK1_28210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rum03032
]
CK1_28210
03400 DNA repair and recombination proteins [BR:
rum03400
]
CK1_28210
Enzymes [BR:
rum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CK1_28210
DNA replication proteins [BR:
rum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CK1_28210
DNA repair and recombination proteins [BR:
rum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CK1_28210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
NID
Motif
Other DBs
NCBI-ProteinID:
CBL20714
LinkDB
All DBs
Position
2464686..2465801
Genome browser
AA seq
371 aa
AA seq
DB search
MKIICSKSSLLKSVSIALKAVPSKTTMPILECILMDATTNQIKFTTNDMELGIETIVEGT
IEEKGKVALDAKIFYEIIRRLPDNDVTIKTDDKYAATITCEKAKFNIPGKSGEDFAYLPM
IEKDEPLTISQYTLKEMIRQTIFSIAVNENNKLMTGELFEIKNNCLKVVSLDGHRISIRK
MSLKKDYSDRKVVVPGKTLSEVSKILSGEVDDQVSIYFTKNHILFEFDQTMVVSRLIEGE
YFRIDQMLSSDYETKLKINKKEFLDCIDRATLLVREVDKKPIIINITDDDMELRIDSAMG
SMNEEIDIEKEGKDIMIGFNPKFLIDALRVIDDETVTIYLVNPKAPCFIRDDEENYTYLI
LPVNINQNQAR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcatctgctccaaatcaagtctgttaaaaagtgtaagtatcgcactcaaagca
gttccatcaaaaaccacaatgccaatcctggaatgtattctcatggatgcaaccacaaac
cagatcaaatttaccaccaacgatatggagctgggaattgaaacgatcgttgagggtact
attgaagaaaaaggtaaagttgctcttgatgcaaaaatcttctatgaaatcatcagacga
cttccggataatgatgttaccattaagaccgatgataaatatgcagcaaccattacctgt
gaaaaagcaaaattcaatatccctggaaaatcaggagaagattttgcttatttaccgatg
atcgagaaggatgaaccgctgacgatctctcagtacacactgaaagaaatgatccgccag
actattttttctattgctgtaaatgaaaacaataaacttatgaccggtgagctttttgag
atcaaaaataactgtctgaaggtagtttctctggacggacatcgtatctctatccgtaaa
atgtcccttaagaaagattattctgaccgtaaggtggtagttccgggcaaaactttaagc
gaggtcagcaagattctttccggagaagtggatgatcaggtcagcatttactttacaaaa
aaccatattttatttgaatttgatcagactatggtagtttccagactgatcgagggagaa
tatttcagaattgaccagatgctttccagtgattatgagacaaaactgaagatcaacaaa
aaagagttcctggattgtatcgaccgtgccacacttctggtacgtgaggttgataaaaaa
ccgatcattatcaacatcacagacgatgatatggagctgcgcattgattctgcaatgggt
tccatgaatgaagagatcgatattgaaaaagagggtaaggatatcatgatcggcttcaac
ccgaaattcctgatcgatgcgcttcgtgttattgatgatgaaaccgtgacgatctatctt
gtaaatccgaaggcaccatgctttatccgtgacgatgaggagaactatacttacctgatc
cttcctgtaaacatcaaccagaatcaggccagataa
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