Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00009
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Entry
RBI_I00009 CDS
T03158
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RBI_I00009 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rus01007
]
RBI_I00009 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rus03016
]
RBI_I00009 (serS)
Enzymes [BR:
rus01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
RBI_I00009 (serS)
Amino acid related enzymes [BR:
rus01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RBI_I00009 (serS)
Transfer RNA biogenesis [BR:
rus03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RBI_I00009 (serS)
Prokaryotic type
RBI_I00009 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CENP-F_leu_zip
UPF0184
DUF4407
Motif
Other DBs
NCBI-ProteinID:
CCO03749
UniProt:
W0U1X7
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All DBs
Position
I:complement(10036..11319)
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AA seq
427 aa
AA seq
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MIDIKLIRTNPELVKENIKKKFQDEKLVLVDEVAQFDEEYRAAKTKADELRNKRKVMSKQ
IGGLMAKGQKDEAEKVKAEVSAIGAELDAMAEKEKDLEAKIRERMLVIPNIIDPSVPIGK
DDSENVEIEKFGEPVVPDYEIPYHVDIMESFNGIDLDSARRTSGNGFYYLMGDIARLHSA
ILSYARDFMIDRGFTYFIPPYMIRSDVVTGVMSFSEMEGMMYKIEGEDLYLIGTSEHSMI
GRFIDTIIPEGELPKTLTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMIVVCKPEDSMA
WYDKLWQNSVDFFRSLDIPVRTLECCSGDLADLKVKSCDVEAWSPRQKKYFEVGSCSNLG
DAQARRLGIRIKAEDGTKYFAHTLNNTVVAPPRMLIAFLENNLNADGTVNIPEPLRMYMG
GKDKITK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgatagatattaagcttatccgtacaaatcctgagcttgtcaaggaaaacatcaaaaag
aagtttcaggacgaaaagctcgttcttgttgacgaggtagctcagtttgacgaggaatac
agagcagctaagacaaaagctgacgagctgagaaataaaagaaaggtaatgagcaagcag
ataggcggtcttatggctaagggtcagaaggacgaagctgagaaagtaaaggctgaggtt
tccgctatcggtgctgagcttgacgctatggctgaaaaggaaaaagaccttgaagctaag
atacgtgagagaatgctcgttatccctaacataatcgacccaagcgttccaataggcaag
gacgacagcgagaacgtagagattgaaaagttcggagagcctgttgttcctgattatgag
atcccatatcacgttgacattatggaaagctttaacggcatcgatcttgacagtgcaaga
agaacatcaggaaacggcttctattatcttatgggcgacattgcaagacttcattctgca
attctttcatatgccagagatttcatgatagacagaggtttcacatatttcattcctcct
tacatgatacgttcagacgttgttacaggcgttatgagcttttctgaaatggaaggcatg
atgtacaagatagagggagaagatctttatctcatcggtacttctgagcattcaatgata
ggtagatttatcgacactatcattccagagggtgagcttccaaaaactctcacaagctat
tcaccatgcttcagaaaagaagttggcgcacacggcatcgaagagagaggcgtttacaga
atacaccagtttgaaaagcaggaaatgatagttgtctgcaaacctgaagatagcatggca
tggtatgacaagctgtggcagaattctgttgatttcttccgttcactcgatattcctgta
agaacacttgagtgctgctcaggcgaccttgcagaccttaaggtaaagagctgtgacgtt
gaggcatggagcccaagacagaagaagtattttgaagttggttcatgctcaaatcttggc
gacgcacaggcaagacgtcttggcataagaataaaggcagaggacggcacgaagtatttt
gctcacactcttaacaacacagttgttgcacctccaagaatgcttatcgcattcctcgag
aacaatctcaatgctgacggaacagttaatatccctgagccactgagaatgtacatgggt
ggcaaggacaagataacaaagtaa
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