KEGG   Ruegeria sp. THAF33: FIU92_11355
Entry
FIU92_11355       CDS       T06269                                 
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rut  Ruegeria sp. THAF33
Pathway
rut00470  D-Amino acid metabolism
rut00550  Peptidoglycan biosynthesis
rut01100  Metabolic pathways
rut01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rut00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    FIU92_11355 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    FIU92_11355 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    FIU92_11355 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rut01011]
    FIU92_11355 (ddlB)
Enzymes [BR:rut01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     FIU92_11355 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:rut01011]
 Precursor biosynthesis
  Amino acid ligase
   FIU92_11355 (ddlB)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3
Other DBs
NCBI-ProteinID: QFT73630
UniProt: A0A5P9GD93
LinkDB
Position
complement(2254117..2255034)
AA seq 305 aa
MSSRTNPKVAVLMGGPSAEREVSLSSGRECAAALVGEGFEVVELDAGPDLCARLVDIKPD
VVFNALHGRWGEDGCVQGLLEWMRIPYTHSGVLASALAMDKQRSKEIYQTEGLPVVPSVI
VPKVEVVEVHVMEPPYVAKPNNEGSSVGIYIVHENANGPPQLDEAMPDLVMVEKYVAGRE
LTVTVMGDRALTVTEIMTDGGWYDYDAKYKPGGSWHVLPADIPQDIFDRCMDYAVRAHNV
LGCKGVSRTDYRWDDSKGADGLFLLETNTQPGMTPTSLVPEQAAHLGMTFGQLCAWMVED
ASCDR
NT seq 918 nt   +upstreamnt  +downstreamnt
atgtcgagcaggacaaaccccaaagtggcggtattgatgggtggaccctcggcggaacgc
gaggtgtctctcagctctgggcgcgaatgcgcggccgcccttgtgggagaaggctttgaa
gtggtcgaactggacgcaggtcccgacctctgcgcgcgccttgtggacatcaaaccggat
gtggttttcaacgccctgcatggccgctggggcgaagatgggtgtgtgcaaggcctgttg
gagtggatgcgcatcccttacacccattccggtgttctggcctcggcgctggcaatggac
aagcagcgcagcaaagagatttaccaaaccgaagggctgcccgtcgtaccgagcgtgatc
gtgcccaaggtcgaggtggtcgaagttcacgtgatggagccgccctatgtggccaagccg
aacaatgaaggctccagcgttgggatttacatcgtccacgaaaatgccaacggcccgccg
cagctggacgaggcgatgcccgatctggtgatggtcgagaaatacgtggcaggtcgcgag
ttgaccgtgaccgtgatgggcgaccgcgccctgaccgtgaccgaaatcatgacagatggc
ggctggtacgactatgacgccaaatacaagcctggcggctcgtggcatgtcctgcccgcc
gacatcccgcaggacattttcgaccgctgcatggactacgccgtgcgggcgcataacgtg
ctggggtgcaagggtgtgtcccgcacggattaccgctgggatgacagcaagggtgccgat
gggttgttcctgctggaaaccaatacccagcccggcatgacgccaacctctctggtcccg
gaacaggccgctcatcttggaatgacattcggccagctctgcgcctggatggtggaggac
gcctcatgcgaccgctga

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