Ruegeria sp. THAF33: FIU92_11355
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Entry
FIU92_11355 CDS
T06269
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut00470
D-Amino acid metabolism
rut00550
Peptidoglycan biosynthesis
rut01100
Metabolic pathways
rut01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FIU92_11355 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FIU92_11355 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
FIU92_11355 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rut01011
]
FIU92_11355 (ddlB)
Enzymes [BR:
rut01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
FIU92_11355 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
rut01011
]
Precursor biosynthesis
Amino acid ligase
FIU92_11355 (ddlB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
QFT73630
UniProt:
A0A5P9GD93
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All DBs
Position
complement(2254117..2255034)
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AA seq
305 aa
AA seq
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MSSRTNPKVAVLMGGPSAEREVSLSSGRECAAALVGEGFEVVELDAGPDLCARLVDIKPD
VVFNALHGRWGEDGCVQGLLEWMRIPYTHSGVLASALAMDKQRSKEIYQTEGLPVVPSVI
VPKVEVVEVHVMEPPYVAKPNNEGSSVGIYIVHENANGPPQLDEAMPDLVMVEKYVAGRE
LTVTVMGDRALTVTEIMTDGGWYDYDAKYKPGGSWHVLPADIPQDIFDRCMDYAVRAHNV
LGCKGVSRTDYRWDDSKGADGLFLLETNTQPGMTPTSLVPEQAAHLGMTFGQLCAWMVED
ASCDR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaggacaaaccccaaagtggcggtattgatgggtggaccctcggcggaacgc
gaggtgtctctcagctctgggcgcgaatgcgcggccgcccttgtgggagaaggctttgaa
gtggtcgaactggacgcaggtcccgacctctgcgcgcgccttgtggacatcaaaccggat
gtggttttcaacgccctgcatggccgctggggcgaagatgggtgtgtgcaaggcctgttg
gagtggatgcgcatcccttacacccattccggtgttctggcctcggcgctggcaatggac
aagcagcgcagcaaagagatttaccaaaccgaagggctgcccgtcgtaccgagcgtgatc
gtgcccaaggtcgaggtggtcgaagttcacgtgatggagccgccctatgtggccaagccg
aacaatgaaggctccagcgttgggatttacatcgtccacgaaaatgccaacggcccgccg
cagctggacgaggcgatgcccgatctggtgatggtcgagaaatacgtggcaggtcgcgag
ttgaccgtgaccgtgatgggcgaccgcgccctgaccgtgaccgaaatcatgacagatggc
ggctggtacgactatgacgccaaatacaagcctggcggctcgtggcatgtcctgcccgcc
gacatcccgcaggacattttcgaccgctgcatggactacgccgtgcgggcgcataacgtg
ctggggtgcaagggtgtgtcccgcacggattaccgctgggatgacagcaagggtgccgat
gggttgttcctgctggaaaccaatacccagcccggcatgacgccaacctctctggtcccg
gaacaggccgctcatcttggaatgacattcggccagctctgcgcctggatggtggaggac
gcctcatgcgaccgctga
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