Rhodomicrobium vannielii: Rvan_1133
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Entry
Rvan_1133 CDS
T01353
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00500
Starch and sucrose metabolism
rva01100
Metabolic pathways
rva01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Rvan_1133
Enzymes [BR:
rva01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Rvan_1133
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_77
CBM_48
Alpha-amylase
Isoamylase_C
ISOA1-3_C
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
ADP70404
UniProt:
E3I3Q7
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All DBs
Position
1249825..1253976
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AA seq
1383 aa
AA seq
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MTAIRVGDGSPEPLGLTLDGRGANFAVFSAHATAIEFCLFDAAGEREIERIRLPSRTGDV
WHGRVEGIGAGTRYGLRAHGPYDPANGHRFNPAKLLVDPYALTLDRPFKLHASMFGYRPG
TDDLTRDDTDSVAAMPKAIALDLSHQPRDARAFAATGAPAILYELHVKGYTKRNPHVPEP
VRGTFAGLADPAAIEHLVKLGVTAVELLPCAAWIDERHLAAVGLTNYWGYNPVAFMAPDP
RLAPDGWAEVRAATDALHAAGIEIIVDVVFNHTGEGDELGPTVSFRGLDNASYYRLRADD
SRFYVNDAGCGNILAADRPAVLRLIMDSLRAWATLGGVDGFRFDLATTLARRETGFDPEA
PLLAAIAQDPVLHRLRLIAEPWDIGPGGYQVGAFPANWSEWNDKFRDSVRRFWRGDSGLA
SEMATRFSGSQDVFGKRGPSASVNFVIAHDGFTLADLVSHERKHNAANGEQNRDGTNDNL
SWNNGVEGATDDAAILAARRRDERALLATLLFARGMPMLVMGAETGQTQHGNNNAYAQDN
ETAWLDWAKADAALTAFTARAIALRAAHPALWRDRFLSGEPQDASSVPDVQWLSPSGAPM
RAEDWTRGDLHTVIAALYAPQTDGIAADRVLVALHAGRDAVRVGLPEPREGFAWRTVLDS
SDETGEPRSASADGVAEIAPRSVVILTEERETDERTKRRNAEPGLLDHLARAAGIAPDWY
DITGERHVVPDDTKRALLSDMGFPAETGGEARASLGRLSDERFRRKLPFSLVAREDEAAT
LRIATDDRRAPRWLIVGREDGGEDAVALEVAASETINAPDGRRIDTIRAPLPSLAPGRYT
LRLETHPDAACRLTVAPRRCYLPERLRDGGKATGLAAQLYSLRRDGDQGIGDFTTLGRIA
EDTAHAGYATLGLNPLHALFPGDRERASPYYPSDRRFLDPLYIDVASLEGARARDAFAQH
AAAFAKLSGTPTVDYAGVWNAKRAVLEAAFADFEAAGDKTSFNAFVAAGGTALAGFALFE
AIGETRPGEPWPAWPDALRNRDPSALASFAAEHAPRVRFHQWTQWVAETQLNEAARRGAD
AGLWLGFYRDLAVGAAPDGAEAWANADQMLKRAAIGAPPDPLAEGGQNWGLRPPNPLAWT
RNGYDVFRGVIAANMRHSGALRIDHAMGLARLFVIPEGASGREGAYIGFPVDDLIGELAL
ESQRARCVVIGEDLGTVPWGFRETMEAADVLSYRVFWFERDGEGFAPPRTYPAKSVACIS
THDLPTLKGWWEGVDIREKEALGLIAPEEAAAARDRRSNDKAALIELLAAEGIAFDASHD
APFDPALTDAAHRLVGTASSLIAIEQIDDLAGETTAVNLPGTDRERPNWRRKLSAMPALG
KQR
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
gtgacggccatccgcgtcggcgatggctcgcccgagccgcttggcctgacgctcgatgga
cgtggcgcgaactttgccgtgttctccgcgcatgcgaccgcaatcgaattttgcctgttc
gatgcggcgggcgagcgcgagatcgagcgcatccgcctgccttctcgcacgggcgatgtg
tggcacggccgcgtcgaggggatcggcgcggggacgcgttacgggcttcgcgcacacggg
ccatatgatcccgcgaacggccatcgcttcaacccggcaaagcttctcgtcgatccgtat
gcgctgacgctcgaccgcccgttcaagcttcatgcgtcgatgttcggctatcggcccggc
accgacgacctcacgcgcgacgataccgacagcgtcgccgcgatgccgaaggctatcgcg
ctcgacctttcgcatcagccgcgcgatgcgcgcgccttcgccgcgaccggcgcgcccgcc
atcctctacgaactgcacgtcaagggctacacgaagcggaacccgcacgtgccggaaccc
gtgcgcggcacctttgccgggctggccgaccccgccgccatcgagcaccttgtgaagctc
ggcgtgacggcggtcgagcttctgccctgcgcggcgtggatcgacgagcgacacctcgcg
gcggtaggcctcacgaattattggggctacaaccccgtcgccttcatggccccagacccg
cgccttgcgcccgacggctgggccgaggtgcgcgcggcgacggatgcgctgcacgcagcg
ggcatcgagatcatcgtggatgtggtcttcaaccacacgggcgaaggcgacgaactcggt
ccaacggtgagctttcgcggcctcgacaacgcaagctactatcggcttcgcgccgacgat
tcgcgcttctatgtgaacgacgcgggctgcggcaacattctcgcggccgaccgccccgcc
gtgctgcgcctcatcatggatagtcttcgcgcctgggcgacgctcggcggcgtggacggc
ttccgcttcgaccttgcgaccacgctcgcgcgccgcgagacgggcttcgaccccgaagcg
ccgctgcttgcggccattgcgcaagatccggtcctgcaccgccttcgcctcatcgcggag
ccgtgggacatcggtcccggcggctatcaggtcggcgcgttcccggcaaattggagcgag
tggaacgacaagtttcgcgatagcgtgcgccgcttctggcgcggcgacagcgggcttgcg
tcggaaatggctacgcggttttccggctcgcaggacgtcttcggcaagcgcggcccgtcc
gcgagcgtgaactttgtcatagcccacgatggcttcacgctggccgacctcgtcagccac
gagcgaaagcacaacgcggccaacggcgagcagaaccgcgacggcacgaacgacaatctg
tcgtggaataacggcgttgagggcgcgaccgacgatgccgccatcctcgcggcgcggcgg
cgcgatgagcgcgcgcttctcgcgacgctccttttcgcacgcggcatgccgatgctcgtc
atgggcgcggaaaccggccaaacgcagcacggcaacaacaacgcctacgcgcaggacaat
gaaaccgcgtggctcgactgggccaaggccgacgcggcgctgacagcgttcacggcccgt
gcgattgcgctgcgggcggcgcacccggcgctgtggcgcgaccgtttcctgtcaggcgaa
ccgcaagatgcgagcagcgtccccgatgtgcaatggctgtcgccgtccggcgcgccgatg
cgggctgaagactggacgcgcggcgaccttcacacggtgatcgctgcactctacgcgccg
cagaccgacggcatcgcggcggatcgcgtgctggttgcgcttcatgccgggcgggacgcg
gtgcgggttgggttgccggaaccgcgcgagggctttgcatggcgcaccgtgctcgatagt
tcggacgaaaccggcgagccgcgaagcgcatcggcggatggggtcgccgaaatcgcgccg
cgctcggttgtgatcctgacagaggaacgagaaacggacgagcggacgaagcgccgcaac
gccgagccagggcttctcgaccacctcgcgcgggcggcgggcatcgcgccggactggtat
gacatcaccggcgaacgccatgtcgtgccggacgacacgaagcgcgcgttgctctccgac
atgggctttcccgccgaaacgggcggcgaggcgcgggcgagcctcggccgcctctcggat
gagcgcttccgccgcaagctgccattttcgcttgtcgcgcgcgaagacgaggcggcgacg
cttcgcatcgcaaccgatgaccgccgcgcaccgcgctggctgatcgtcgggcgcgaggac
ggcggcgaggatgccgtcgcgcttgaagtggccgcgtccgaaacgatcaacgcgccggac
ggccgccgcatcgacacgatccgcgcgcccctgccctcgctcgcgcccggccgctacacg
ctccgccttgaaacccaccccgacgccgcgtgccgcctgacggttgcgccgcgccgctgc
tatctgcccgagcggctccgcgatggcggaaaggcaaccggcctcgccgcgcagctctat
tcgctccgacgagatggcgatcagggcatcggcgatttcacgacgcttggccggatcgct
gaagacaccgcgcacgctggctatgccacgctcggcctgaacccgctgcacgcgctgttt
ccgggcgatcgcgagcgcgccagcccttattacccgtctgaccggcgcttcctcgatccg
ctttatatcgatgtcgcatcgctcgaaggcgcccgcgcgcgcgatgcattcgcacagcat
gccgccgccttcgccaagctttcgggcacgccgaccgtcgattacgcgggcgtctggaat
gccaagcgcgccgttcttgaggcggcgttcgcggatttcgaggcggcgggcgacaagacg
agtttcaacgcctttgtcgcggcgggcggcacagcgctcgcaggcttcgcgctgttcgag
gcaatcggcgagacgcgccccggcgaaccttggcccgcatggcccgacgcgcttcgcaac
cgcgatccgtccgcgctcgcgtccttcgcggcggagcatgcgccacgcgtccgcttccat
caatggacgcaatgggtcgccgagacgcagctcaatgaagccgcgcggcgcggcgctgac
gccgggctgtggctcggcttttatcgcgacctcgccgtgggcgctgcaccggacggcgcg
gaagcctgggcgaacgcggatcagatgctcaagcgcgcagccatcggcgcaccgcccgat
ccgctagccgagggcggccagaactgggggcttcggccgccgaacccgctggcctggacg
cgcaacggctacgatgtgtttcgcggcgtcatcgcggcaaacatgcgtcactcgggcgcg
cttcgcatcgaccacgcgatgggcctcgcgcggcttttcgtaattcccgagggcgcgagc
ggccgcgaaggcgcgtatatcggctttcccgtggacgatctcatcggcgaactcgcgctg
gaaagccagcgcgcgcgctgcgtcgtcatcggcgaagacctcggcaccgtgccttggggc
ttccgcgagacgatggaagcggcggacgtgctgagctatcgcgtcttctggttcgagcgc
gacggcgaaggcttcgctccgccccgcacctaccctgcgaagtccgtagcgtgcatatcg
acgcacgatttaccgacgctgaaaggctggtgggaaggcgtggacatccgcgagaaggaa
gcgctcggcctcatcgcaccggaagaagcggcggcagcacgcgaccggcgctcgaacgac
aaggccgcgctcatagagcttcttgcggcggaaggcatcgcgttcgatgcatcgcacgat
gcgccattcgatcctgctctgacggacgccgcgcatcgcctcgtcggcaccgcgtcctcg
cttatcgccatcgagcagatcgacgacctcgcgggcgagacgaccgccgtcaaccttccc
ggcaccgaccgcgagcgcccgaactggcggcgcaagctctccgcgatgcctgcgctgggc
aaacagcggtag
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