Rhodomicrobium vannielii: Rvan_3121
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Entry
Rvan_3121 CDS
T01353
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00300
Lysine biosynthesis
rva01100
Metabolic pathways
rva01120
Microbial metabolism in diverse environments
rva01230
Biosynthesis of amino acids
Module
rva_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rvan_3121
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rva01002
]
Rvan_3121
Enzymes [BR:
rva01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Rvan_3121
Peptidases and inhibitors [BR:
rva01002
]
Metallo peptidases
Family M20
Rvan_3121
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ADP72323
UniProt:
E3I100
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All DBs
Position
3399416..3400567
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AA seq
383 aa
AA seq
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MTSATEYAQTLIRCESVTPDDAGALAYLERELGAAGFACERLRFSEPGTADVENLYARLG
DGTPHICFAGHIDVVPPGDEAAWRLPPFAGEIENGVLYGRGAVDMKGAVAASLAAALEYL
REKPDLVGSISFLITADEEGPSINGTRKVVERLIARGERPDACVLGECTSEDAVADTIKI
GRRGSLGAELIVRGVQGHVAYPHKARNPLPALIDALTRLKARRLDDGSEHFQPSNLEITT
IDTGNKATNIIPAQASARFNIRFNDLHTAPQLKAWIEEEVAAALLDTGVEHTLNFDQPSD
SFLTSPGGFVKMLGAAVQAETGREPVLSTGGGTSDARFIKDMCPVAELGLLNATAHKVDE
HTATADIETLARIYKRFLHLAIG
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcgctacagagtatgcacagaccctcattcgctgcgaaagcgtcacgcccgac
gatgccggcgcgctcgcctatctcgaacgcgagcttggcgcagcgggcttcgcctgcgag
cggctgcgcttcagcgaacccggaacggccgatgtggaaaatctttacgcccgccttggc
gacggcacgccgcatatctgcttcgcgggccatatcgatgtcgtgccgcccggcgacgaa
gcggcgtggcggcttccgcctttcgcgggcgagatcgaaaacggcgtgctgtacgggcgc
ggcgcggtcgacatgaaaggcgcggtcgcggcctcgctggcggcggcgctggaatatttg
cgcgaaaagccggacctcgtcggctccatcagcttcctcatcaccgccgacgaggaaggg
ccgtccatcaacgggacgcgcaaggtggtcgagcgcctcatcgcgcgcggcgaacgcccc
gatgcttgcgtgctcggcgaatgcacgtccgaggacgccgttgccgatacgatcaagatc
gggcgtcgcggctcgctcggcgcggaactgatcgtgcgcggcgtgcagggccacgtcgct
tatccgcacaaggcgcgcaaccctctgcccgccctcatcgacgcgctgacgcgcctcaag
gcgcgccgcctcgacgacggcagcgagcatttccaaccgtcgaacctggaaatcaccacc
atcgacaccggaaacaaggcgacgaacatcattccggcgcaggcgagcgcgcgcttcaac
atccgcttcaacgatctccacaccgcgccccagctcaaggcttggatcgaggaggaggtg
gccgctgcgctgctcgataccggcgtggagcacacgctgaacttcgatcagccatccgac
agttttcttacgagccccggcgggttcgtgaaaatgctgggcgcagcggttcaggccgaa
accgggcgggagccggtgctgtccacgggcggcggtacatcggacgcgcgcttcatcaag
gatatgtgcccggtcgccgaactcggcctcctgaacgccacggcgcacaaggtggacgag
catacggcaactgcggacatcgagacgctcgcgcgcatctacaagcgcttcctgcacctc
gccatcggatga
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