KEGG   Candidatus Rickettsiella viridis: RVIR1_09540
Entry
RVIR1_09540       CDS       T05765                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rvi  Candidatus Rickettsiella viridis
Pathway
rvi00010  Glycolysis / Gluconeogenesis
rvi00020  Citrate cycle (TCA cycle)
rvi00260  Glycine, serine and threonine metabolism
rvi00280  Valine, leucine and isoleucine degradation
rvi00310  Lysine degradation
rvi00380  Tryptophan metabolism
rvi00620  Pyruvate metabolism
rvi00630  Glyoxylate and dicarboxylate metabolism
rvi00640  Propanoate metabolism
rvi00785  Lipoic acid metabolism
rvi01100  Metabolic pathways
rvi01110  Biosynthesis of secondary metabolites
rvi01120  Microbial metabolism in diverse environments
rvi01200  Carbon metabolism
rvi01210  2-Oxocarboxylic acid metabolism
rvi01240  Biosynthesis of cofactors
Module
rvi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rvi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rvi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:rvi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RVIR1_09540 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RVIR1_09540 (lpdA)
   00620 Pyruvate metabolism
    RVIR1_09540 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RVIR1_09540 (lpdA)
   00640 Propanoate metabolism
    RVIR1_09540 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RVIR1_09540 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RVIR1_09540 (lpdA)
   00310 Lysine degradation
    RVIR1_09540 (lpdA)
   00380 Tryptophan metabolism
    RVIR1_09540 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RVIR1_09540 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rvi04147]
    RVIR1_09540 (lpdA)
Enzymes [BR:rvi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RVIR1_09540 (lpdA)
Exosome [BR:rvi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RVIR1_09540 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 FAD_binding_2 NAD_binding_8 GIDA AlaDh_PNT_C DAO HI0933_like Thi4 FAD_binding_3 PRY
Other DBs
NCBI-ProteinID: BBB15432
UniProt: A0A2Z5V4S3
LinkDB
Position
complement(984939..986375)
AA seq 478 aa
MADLETKKTEVLVLGSGPGGYTAAFRAADLGKKVILVEKDATLGGVCLNVGCIPSKALLH
AAKVIEDAAAMKEFGVEFAKPKIDINKLRTWKESVVKRLTGGLSMLAKQRKVEVIQGEGK
FTAKNELTIKTEAGQQVVQFEQAIIAAGSQPVRLPFLPNDPRIIDSTGALELKETKGDLL
VLGGGIIGMEMATVYHALGASITVVEGGSRIIAGADEDIVKPLSKRLSKHYKFILNTRVT
KVEAKKDGLWVSFEGENVPDKPQRYDRILSAVGRKPNGKLIGAEVLGIDIDDRGFIAVDK
QLRTKVNHIFAIGDIVGNPMLAHKAVAEARVAAEVIVGKKHFFEPRCIPSVAYTDPEIAW
VGLTEMEAKEKNIVYEKAVFPWMASGRSLGQGRDEGLTKLLFDPKTQRVLGAGIVGPNAG
ELISEIALAIEMGCEAEDIALTIHPHPTLSETVMLASEIFEGSITDLYMPKKKAEVIH
NT seq 1437 nt   +upstreamnt  +downstreamnt
atggctgacttagaaactaaaaagactgaagtgctggtgttaggaagtggcccaggtggt
tatacggcggcttttcgtgccgcggatttagggaaaaaagtcatattagtagaaaaggat
gcgactttagggggtgtttgtttaaacgtggggtgtattccctctaaagcattattgcat
gccgctaaagtcattgaagatgcggctgcgatgaaagagtttggtgtagagtttgctaag
cctaaaatagatattaataaacttcgtacttggaaagaaagcgtagttaaaaggctaacc
ggtggtttatcgatgttagctaaacaacgtaaagtcgaagtgattcaaggcgaaggaaaa
tttacggctaaaaatgaattaaccatcaaaacagaagcaggtcagcaagtggtgcaattt
gagcaggccattattgcggcgggatcgcagccagttcggttaccttttttaccgaatgat
ccacgtattatcgattcaaccggcgcgttagagctgaaagaaaccaaaggtgatctctta
gtgttaggtggcggtattattggtatggaaatggccacagtttatcacgcgctgggtgct
tcgattaccgtggtagaaggtggtagtcgaattattgcaggcgccgatgaagatattgtt
aagccgctttctaaacgtcttagtaaacattataaatttatcctcaatacacgcgttact
aaagttgaagctaaaaaagatggcttgtgggttagttttgaaggtgagaatgtacccgat
aaaccacaacgttatgatcgtattttatccgcggtagggcgtaaaccgaatggaaaatta
attggagcagaagtattaggtattgatatagatgatcgcggttttattgcggtggataaa
caattaagaaccaaggttaatcatatttttgcgattggcgatatcgtaggtaatcctatg
ttagcgcataaagccgtggctgaagcgcgtgtggcggcggaagtgattgtcggtaaaaaa
cacttttttgaaccacgttgtattccttcggttgcttataccgatccagaaatcgcttgg
gttggattgacagaaatggaagctaaagagaaaaatattgtttatgaaaaagccgtgttt
ccttggatggccagcggtcgttcattaggtcaggggcgtgacgaaggcttaactaaatta
ttatttgatcctaaaacacagcgtgtgttaggcgctggtattgtcggtccgaatgcgggt
gaattaattagtgaaattgccttagcgattgaaatgggctgcgaagcggaagatattgcc
ttaaccatacacccacacccaacattgtctgaaacggtaatgttagccagtgaaatattt
gagggcagcattacggatctttatatgccgaagaagaaagctgaagtaatacattaa

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