Allosaccharopolyspora coralli: GIY23_15950
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Entry
GIY23_15950 CDS
T06288
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
sace
Allosaccharopolyspora coralli
Pathway
sace00550
Peptidoglycan biosynthesis
sace01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sace00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GIY23_15950 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sace01002
]
GIY23_15950 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sace01011
]
GIY23_15950 (dacB)
Enzymes [BR:
sace01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GIY23_15950 (dacB)
Peptidases and inhibitors [BR:
sace01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
GIY23_15950 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sace01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
GIY23_15950 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
QGK70808
UniProt:
A0A5Q3Q8B9
LinkDB
All DBs
Position
complement(3411033..3412604)
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AA seq
523 aa
AA seq
DB search
MRRRWALVLSSVATLVVVGGVPTTAAPSGPDSLRADLDRILSDPRLAASHAGVVVRDTET
GELLYSREGKARATPASNAKLVTSAAALETLGPDFRFGTEVRAAGEQDGGVLNGDLFLRG
EGDPTMRAEEYDALAAQVAESGIQEIRGDLVADDSWFDDVPLGTGWAWDDEPYYYAAPVS
ALTVAPNEDFDAGTAIVRVSPAVEGAAPGVELVPATGVLEVDNRATTGPPGSDADLTVER
EHATNRVVVTGSVPAGGEAVEEFASVPDPTAYAADVFARALAAHGVEVSGVGEGTTPEGA
SVVASRESIPLSELLVPFMKLSNNGHAEVLTKAMGRAERGEGSWSAGTDVIAARLADFGV
DPEQVRFVDGSGLSTMDVVAPRDLATVLTEARKRPWFDAWYRSLPVAGVPERFVGGTLRN
RMRDTPAENNVHAKTGSLTGVTSLSGYVTARNGHQLVFSVLFNDFVSPSPQDLEDAVAVR
LAEYDGADDQSRPAVRLRSVLPQDDPRTEVDESQLECSWVKAC
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgtcgctgggctctcgttctgtcgtccgtcgcgaccttggtggtggtcggcggg
gtgcccacgaccgcagcgccgtccggaccggactcgttgcgtgccgatctcgaccggatc
ctctccgacccgcgcctggcggcctcacacgcgggcgtggtcgtgcgggacaccgagacg
ggggagctgctctactcccgcgagggcaaggcccgtgcgacccccgcttcgaacgcgaag
ctcgtgacgtcggcggcggcgctggagaccctcggtcccgatttccgcttcggcaccgag
gtccgggccgcgggggagcaagacggcggtgtcctgaacggggacctgttcctgcgcggc
gagggtgacccgaccatgcgggccgaggagtacgacgcgttggccgcccaggtggccgaa
tcgggcatccaggagatccgcggcgatctcgtcgccgacgactcgtggttcgacgatgtg
ccgctcggaacgggctgggcctgggacgacgagccctactactacgcggccccggtttcg
gcgctgaccgtggcgccgaacgaggatttcgacgcgggcacggcgatcgtgcgggtgtct
ccggcagtcgagggtgcggcgcctggcgtcgagctggttccggcgaccggtgtgctggag
gtcgacaaccgcgcgacgaccggacctcccggttccgacgcggatctgaccgtggaacgc
gagcacgccacgaaccgagtcgtcgtcaccggttcggttccggcaggcggagaagcggtc
gaagagttcgccagcgtcccggatccgaccgcgtacgccgcggacgtgttcgcccgagct
ttggccgcacacggcgtcgaggtctccggagtcggcgaggggacgacaccggagggtgcg
tcggtggtcgcctcgcgggagtcgattccgttgtcggagctcctggtgccgttcatgaag
ttgagcaacaacggccacgcggaggtgctcacgaaggcgatgggccgcgccgagcgcggt
gagggaagctggtcggcgggcaccgacgtgatcgccgcacggctcgcggacttcggcgtc
gacccggaacaggtccgcttcgtcgacggctccggtctgtccacgatggacgtggtggcg
ccccgtgacctcgcgacggtgctcaccgaggctcggaagcggccgtggttcgacgcctgg
taccggtcgctgccggtggcgggcgtgccggagcggttcgtcggaggcacgttgcgcaac
cgcatgcgcgacactccggccgagaacaacgtgcacgccaagaccggctcactgaccgga
gtcacgtccctgtccgggtacgtgacggcgcgcaacggtcaccagctggtgttttcggtg
ctgttcaacgacttcgtctcaccttcgccgcaggacctcgaggacgcggtcgcggtgcgc
ctcgccgagtacgacggcgccgacgaccagtcgcgccctgccgtgcggctgcgctcggtg
ctcccgcaggacgatccgaggaccgaggtcgacgaatcgcagctggagtgcagctgggtc
aaagcctgctga
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