Allosaccharopolyspora coralli: GIY23_18900
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Entry
GIY23_18900 CDS
T06288
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sace
Allosaccharopolyspora coralli
Pathway
sace00521
Streptomycin biosynthesis
sace00523
Polyketide sugar unit biosynthesis
sace00525
Acarbose and validamycin biosynthesis
sace00541
O-Antigen nucleotide sugar biosynthesis
sace01055
Biosynthesis of vancomycin group antibiotics
sace01100
Metabolic pathways
sace01110
Biosynthesis of secondary metabolites
sace01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sace00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GIY23_18900 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GIY23_18900 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GIY23_18900 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GIY23_18900 (rfbB)
00525 Acarbose and validamycin biosynthesis
GIY23_18900 (rfbB)
Enzymes [BR:
sace01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GIY23_18900 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QGK71314
UniProt:
A0A5Q3QDN3
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Position
complement(4062496..4063485)
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AA seq
329 aa
AA seq
DB search
MRVLVTGGAGFIGSHYVRQVLTGAYPAFADATVTVLDKLTYAGNEQNLAPVADHPRFRFV
RGDVCDAALVRDLVSATDVIVHFAAETHVDRSIVGASDFVVTNVVGTDTLLQAALDHGVD
KLVHVSTDEVYGSIEDGSWPEEHALEPNSPYSAAKAGSDLLARAYYRTHGLPVCVTRCSN
NYGPYQFPEKVLPLFVTNLLDGEPVPLYGDGLHVRDWLHVDDHCRGVQLVAESGRAGEVY
NIGGGIELTNREFTERLLAEMGLGESWIRPVEDRKGHDRRYSVDWTKIRTELGYEPQVGF
AEGLADVVRWYRENRDWWEPLKKATGGRR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttctggtcaccggcggagcgggtttcatcggctcccactacgtgcggcaggtc
ctcaccggcgcctacccggcgttcgccgacgcgacggtcacggtcctcgacaaactcacg
tacgcgggcaacgagcagaacctcgcgccggtcgccgatcacccccggttccggttcgtt
cgtggcgacgtgtgcgacgccgctctggtgcgcgacctggtgtccgcgaccgacgtcatc
gtgcatttcgccgccgagacgcacgtggaccgctcgatcgtcggcgcgtcggacttcgtg
gtcacgaacgtcgtcggcaccgacacgctgctgcaggccgcgctggaccacggcgtcgac
aagctcgtgcacgtctcgaccgacgaggtctacggctcgatcgaggacggttcgtggccg
gaggagcacgcgctggagccgaactcgccgtactccgcggcgaaggcggggtcggacctg
ctcgcccgcgcctactaccgcacgcacgggttgccggtgtgcgtgacgcggtgctcgaac
aactacggcccgtaccagttcccggagaaggtgctgccgttgttcgtcacgaacctgctc
gacggcgagcccgtcccgctctacggggacgggctccacgtgcgggactggctgcacgtt
gacgaccactgccgcggtgtccagctggtggccgagtccggccgcgcgggtgaggtctac
aacatcggcggtggcatcgagctgaccaacagggaattcaccgaacggctgctggccgag
atggggctcggggagtcctggatccggccggtcgaggaccgcaagggccacgaccggcgg
tactcggtcgactggacgaagatccgcacggagctgggttacgagccgcaggtcggtttc
gccgaggggctcgcggacgtggtgcgctggtaccgcgagaaccgcgactggtgggagccg
ttgaagaaggccaccgggggtcgtcgatga
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