Saccharopolyspora sp. ASAGF58: FDZ84_05545
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Entry
FDZ84_05545 CDS
T06538
Name
(GenBank) ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
sacg
Saccharopolyspora sp. ASAGF58
Brite
KEGG Orthology (KO) [BR:
sacg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sacg03019
]
FDZ84_05545
03016 Transfer RNA biogenesis [BR:
sacg03016
]
FDZ84_05545
Enzymes [BR:
sacg01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
FDZ84_05545
Messenger RNA biogenesis [BR:
sacg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FDZ84_05545
Transfer RNA biogenesis [BR:
sacg03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
FDZ84_05545
Prokaryotic type
FDZ84_05545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
QIZ34300
UniProt:
A0A6H1R2C4
LinkDB
All DBs
Position
complement(1224630..1225055)
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AA seq
141 aa
AA seq
DB search
MKRITSKTVQILLAGLIAVVGLVGYQASALSAAPTAPVAQAPCGDTSGFQKADLSALPKE
ATDTVNLIKQGGPYPYPQDGQVFSNREGILPKCDSGYYHEYTVKTPGSDDRGARRFVVGN
GGEYFYTDDHYDSFRLTNINA
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggatcacatcgaagacagtgcagatcctgttggccggtctgatcgcggtcgtg
ggcctggtcgggtaccaggcgagcgccctgtccgccgcgccgaccgcgcccgtcgcgcag
gcgccgtgcggggacacctccggcttccagaaggccgacctctccgccctgcccaaggag
gcgaccgacacggtcaacctgatcaagcagggcggcccctacccgtatccgcaggacggc
caggtcttctcgaaccgggaaggcatcctgccgaagtgcgacagcgggtattaccacgag
tacaccgtcaagacgcccggcagcgacgaccgcggcgcgcgccgcttcgtggtcggcaac
ggcggcgagtacttctacaccgacgaccactacgacagcttccggctgaccaacatcaac
gcgtag
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