KEGG   Sulfolobus acidocaldarius Ron12/I: SacRon12I_03805Help
Entry
SacRon12I_03805   CDS       T02453                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
sacr  Sulfolobus acidocaldarius Ron12/I
Pathway
sacr03030  DNA replication
sacr03410  Base excision repair
sacr03420  Nucleotide excision repair
sacr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sacr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SacRon12I_03805
   03410 Base excision repair
    SacRon12I_03805
   03420 Nucleotide excision repair
    SacRon12I_03805
   03430 Mismatch repair
    SacRon12I_03805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sacr03032]
    SacRon12I_03805
   03400 DNA repair and recombination proteins [BR:sacr03400]
    SacRon12I_03805
Enzymes [BR:sacr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SacRon12I_03805
    6.5.1.6  DNA ligase (ATP or NAD+)
     SacRon12I_03805
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     SacRon12I_03805
DNA replication proteins [BR:sacr03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    SacRon12I_03805
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     SacRon12I_03805
DNA repair and recombination proteins [BR:sacr03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SacRon12I_03805
   NER (nucleotide excision repair)
    Other NER factors
     SacRon12I_03805
   MMR (mismatch excision repair)
    Other MMR factors
     SacRon12I_03805
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-ProteinID: AGE73008
UniProt: M1IB69
LinkDB All DBs
Position
complement(630113..631909)
Genome map
AA seq 598 aa AA seqDB search
MEFKLIAEYFDRLEKISSRIQLTALLTDLLKKSDKDVIDKVIYITQGKLWPDFFEKPEIG
LGEKLMIKALSVSTNIKEDEIEKQLRILGDLGEVAYKLKRTNSSQNVLSYLGSTKVTKLT
VEEVYESLSKIALSEGEGSRDMKIRSLAGLLKKADPLEAKYIIRFIDGRLRVGIGDATIM
DALANVFGGGTAARPLIERAYNLRADLGNIAKLLAENGIETIKSIKPEVGIPIRPMLAER
LTDPSEILAKVGGKGIVDYKYDGERAQIHKKGEKVYIFSRRLENITRQYPDVVEYIKNSI
KSNEVILEGEIVAIDKESGEILPFQNLMHRKRKNDIGEAIKEYPVNVYLFDLMYNDGEDY
TQKPLPDRREKLEEIVTQNDIVKVADHKYIDKVNELVEYFHQAISDGTEGVIVKSIGKDS
IYQAGARGFLWIKLKKDYQSEMADSVDLVIVGAFYGRGKRGGKLSSLLMAAYDPDKDTFY
TVCKVASGFSDAELEEVQKMLSEAKLDKKDPRVESEIQPDIWVKPKYVAEIIGAEITLSP
LHTCCKGVVSEEAGLSIRFPRFIRWRDDKSVEEATTPNEILEMYQSRLKKKVEDITET
NT seq 1797 nt NT seq  +upstreamnt  +downstreamnt
gtggagtttaaattaattgctgaatattttgacagattggaaaaaatttcatcaagaatt
cagctcacagctctcttaacggatttgttaaagaaatcagataaggatgtaatagataaa
gttatatatattactcaaggtaaattgtggccggacttctttgagaagcctgaaatcggt
cttggagaaaaacttatgattaaagcactctcagtttcaactaacataaaagaagatgaa
attgaaaagcaattacgaattctgggtgacctaggagaggtagcttacaaacttaagaga
actaattcatcacaaaatgtcctatcgtatttaggttccactaaggtaactaagctaact
gtagaagaggtttatgaatcactgagtaagatagcattgtctgagggagaaggaagcaga
gatatgaaaatacgttccctagcagggctcctcaaaaaagctgatccattggaggctaaa
tacataattagattcattgatggtagattgagagttggcataggtgatgccacaatcatg
gacgcgttagcaaatgtatttggtggtggaactgctgcacggccgttgatagaacgtgca
tataatttgagagctgatctcggaaatatagctaaacttttagcagaaaatggcatagag
actataaagtcgattaaaccagaggttgggataccgattagaccaatgcttgctgaaaga
ttgacagacccatcagaaatattagccaaagttggcggtaaaggaatagtagactataag
tatgatggagagagagctcaaatccacaaaaaaggtgagaaagtttatatcttctctaga
cgactagagaatataaccagacagtacccagacgttgttgagtacataaaaaactctatc
aaaagtaatgaagttattcttgaaggagaaatagttgcgatagataaagaaagcggagag
atccttcccttccagaacctaatgcataggaaaagaaagaatgatataggcgaggctata
aaggagtacccggtcaatgtatatctatttgatctcatgtataatgacggtgaagattat
acacaaaaacccttaccagacagaagagaaaaattagaggaaattgtgacacagaacgat
atagttaaggttgcagatcacaaatatattgataaagttaatgagttggtagagtatttc
catcaggcaattagtgatggcacagaaggtgttatagtaaaatctataggtaaagactca
atatatcaagcaggagctaggggatttttgtggataaaattaaagaaagactatcaaagc
gaaatggctgatagcgttgatctggttattgtgggagctttctatggcaggggtaaaagg
ggaggtaaactcagttccttattaatggcagcatatgatcctgataaagatactttctat
actgtgtgtaaagtggcatcaggcttcagtgatgctgaattagaggaagtacaaaagatg
ttatctgaagctaaattagataaaaaagatcctagagtggaatctgaaatacaaccagat
atatgggtaaaaccgaaatatgtagctgaaatcattggtgctgaaataaccttatctcca
ttacatacttgttgcaagggtgttgtctcagaagaagctggtttatccataagatttcca
cgcttcataagatggagggatgacaaaagcgttgaagaagccacaacaccaaatgagata
ttagagatgtatcagagtagactgaaaaagaaagttgaggacataacagagacatag

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