Stenotrophomonas acidaminiphila: AOT14_23330
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Entry
AOT14_23330 CDS
T04107
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sacz
Stenotrophomonas acidaminiphila
Brite
KEGG Orthology (KO) [BR:
sacz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sacz03021
]
AOT14_23330
Transcription machinery [BR:
sacz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AOT14_23330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
HTH_WhiA
Sigma70_ECF
TilS
DUF6456
HTH_23
GerE
DUF746
DUF2089
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ALJ28701
UniProt:
A0A0S1B0Z4
LinkDB
All DBs
Position
2572201..2572758
Genome browser
AA seq
185 aa
AA seq
DB search
MDTALQAPTDEALMLAYAEGDGEAFAELYARHRARLFHYLLGQLRDRSLAEELFQDVWQR
MILARSRWKPEASFATWLFRIAHNRLNDHWRAARHRPAAPDDADQRTARLADTCTPELLA
GEQAERLRLRQAMAELPQEQQEVLILRLEQELSLEEIGQITGVGRETVKSRLRYAMDKLR
ARLSE
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtggataccgccctccaagccccgaccgacgaagcgctgatgctggcctacgccgaaggc
gacggcgaggccttcgccgagctgtatgcgcgccatcgcgcgcggctgttccactacctg
ctgggccagctgcgcgaccgctcgctggccgaggaactgttccaggacgtgtggcagcgg
atgatcctggcccgctcgcgctggaagccggaggcgagcttcgccacctggctgttccgc
atcgcccacaaccgcctgaacgaccactggcgcgccgcacggcaccggcccgccgccccg
gacgatgccgaccagcgcaccgcgcgcctggccgacacctgtaccccggaactgctggcc
ggcgagcaggccgagcggctgcggctgcgccaggccatggctgagctgccgcaggagcag
caggaagtcctgatcctgcgcctggagcaggaactgagcctggaggagatcgggcagatc
accggcgtgggccgggaaaccgtcaagtcgcggctgcgctatgcgatggacaagctgcgc
gcgaggttgagcgaatga
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