Shewanella aestuarii: HBH39_00015
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Entry
HBH39_00015 CDS
T06921
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
saes
Shewanella aestuarii
Pathway
saes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HBH39_00015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saes03400
]
HBH39_00015 (recF)
DNA repair and recombination proteins [BR:
saes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HBH39_00015 (recF)
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Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_16
AAA_29
AAA_27
AAA_13
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QIR13073
UniProt:
A0A6G9QFY5
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All DBs
Position
PN3F2:2598..3680
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AA seq
360 aa
AA seq
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MSLRRITISSFRNILSANLSTGGGLNLIYGQNGSGKTSILEAIFFLGMGRSFRSHLSQRV
INTDADNLTLFAQLLDGEEQTKIGLRRHRSGDIEVKINGDKVKKLSILAEALPIQVITPE
SFALLFEGPKARRQFVDWGAFHSDPQFYQAWMNTRRILKQRNQLLRNQASYSQIQFWDKE
LVRYAEQVTLIRNHYVDSLNALLKGIISEFLPQVDINVSFTRGWDSKTDFSQLLENQYPR
DLATGHTVSGPHKADLRLRVGSLPAQDALSRGQLKLLVCALRIAQGKLLKQQLNKNSIYL
VDDLPSELDAQHRQLLLKQLTETGAQIFVTAIDPAAIVDSLLSPPDRMFHVEHGQVTVIE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcgtcgtataaccattagctcatttcgaaatattctgtcagctaatctcagc
acaggcggtgggcttaatttaatttatggccaaaatggcagtggcaaaaccagtatttta
gaagctattttctttttaggtatggggcgatcttttcgtagccacttatctcagcgagtg
atcaataccgatgccgataatttaactttatttgctcagcttttagatggagaagagcaa
acaaaaataggtttacgtcgtcatcgtagtggcgacattgaagttaaaattaacggtgat
aaagtcaaaaaattatctattttggctgaagcattgcccattcaagtcattacccctgaa
agttttgccttattgtttgaagggccaaaagccagaaggcaatttgttgattggggagca
tttcattctgacccacaattctatcaagcttggatgaataccaggcgtattttaaaacaa
cgaaatcagcttcttagaaatcaagcaagctattctcaaatacagttttgggataaagaa
ttggtacggtatgctgagcaagttaccctgatacgaaatcactatgtagactcgttaaat
gcgctactaaagggtataataagcgagtttttacctcaggttgatattaacgtttctttt
acccgaggatgggatagcaaaacggatttttcgcaattactcgaaaaccaatatccacga
gatttagccaccggacacacggtaagcggcccgcataaagcggatttacgattacgtgtg
ggcagtttgccggcgcaggatgcgttatcacggggtcagttaaaattattagtctgtgca
ctgcgtattgcacagggaaagttgctcaaacaacagctaaataaaaacagtatttattta
gtcgatgatttaccgtcagagttggatgcacagcataggcagctattgttgaaacagtta
accgaaaccggcgcgcaaatttttgtcaccgcaatcgatcctgcagcaatagtcgattcg
ttattaagccctcccgacaggatgtttcatgtggaacatgggcaagtaacggttattgaa
taa
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