Simiduia agarivorans: M5M_14840
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Entry
M5M_14840 CDS
T02281
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
saga
Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saga03019
]
M5M_14840
03009 Ribosome biogenesis [BR:
saga03009
]
M5M_14840
Messenger RNA biogenesis [BR:
saga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M5M_14840
Ribosome biogenesis [BR:
saga03009
]
Eukaryotic type
Pre-60S particles
RNases
M5M_14840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AFV00103
UniProt:
K4L1Q3
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All DBs
Position
3224228..3224776
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AA seq
182 aa
AA seq
DB search
MTQLADDNLIWIDLEMTGLDPDTDVIIEIATIVTDAQLNILAEGPVYAIQQPKAVMDAMD
DWNTNQHGKSGLTQRVLDSKVTLQQAEADTIAFLEKWVPKGKSPICGNSICQDRRFLVRG
MPALERYFHYRNLDVSTVKELARRWAPEVLNGVKKSSTHLAMDDIKDSIAELHHYRKTFI
KA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgacccaattggctgacgacaacctcatctggattgacctggaaatgaccggcctggac
ccggataccgatgtcatcatcgaaatcgccaccatcgtcaccgacgcccagctcaacata
ctggccgaaggccccgtatacgccattcagcaacccaaggccgtcatggacgccatggat
gattggaataccaatcagcacggaaagtcgggcttaacccagcgggtactggattccaag
gtaacgcttcagcaagcagaggcggacaccatcgcctttttagaaaagtgggtgcccaag
ggcaaatcgccgatctgcggtaactccatctgccaggaccgtcgctttttagtgcgcggt
atgccggcacttgagcgctacttccattaccgcaacctggatgtcagcaccgttaaagag
ctggcccgccgctgggcgccagaggtacttaacggcgtgaaaaaatcatcaacccacctg
gcgatggacgatatcaaagattccatcgccgagctgcatcattaccgcaaaacgttcata
aaagcttaa
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