KEGG   Simiduia agarivorans: M5M_14840
Entry
M5M_14840         CDS       T02281                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
saga  Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:saga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:saga03019]
    M5M_14840
   03009 Ribosome biogenesis [BR:saga03009]
    M5M_14840
Messenger RNA biogenesis [BR:saga03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     M5M_14840
Ribosome biogenesis [BR:saga03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    M5M_14840
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AFV00103
UniProt: K4L1Q3
LinkDB
Position
3224228..3224776
AA seq 182 aa
MTQLADDNLIWIDLEMTGLDPDTDVIIEIATIVTDAQLNILAEGPVYAIQQPKAVMDAMD
DWNTNQHGKSGLTQRVLDSKVTLQQAEADTIAFLEKWVPKGKSPICGNSICQDRRFLVRG
MPALERYFHYRNLDVSTVKELARRWAPEVLNGVKKSSTHLAMDDIKDSIAELHHYRKTFI
KA
NT seq 549 nt   +upstreamnt  +downstreamnt
atgacccaattggctgacgacaacctcatctggattgacctggaaatgaccggcctggac
ccggataccgatgtcatcatcgaaatcgccaccatcgtcaccgacgcccagctcaacata
ctggccgaaggccccgtatacgccattcagcaacccaaggccgtcatggacgccatggat
gattggaataccaatcagcacggaaagtcgggcttaacccagcgggtactggattccaag
gtaacgcttcagcaagcagaggcggacaccatcgcctttttagaaaagtgggtgcccaag
ggcaaatcgccgatctgcggtaactccatctgccaggaccgtcgctttttagtgcgcggt
atgccggcacttgagcgctacttccattaccgcaacctggatgtcagcaccgttaaagag
ctggcccgccgctgggcgccagaggtacttaacggcgtgaaaaaatcatcaacccacctg
gcgatggacgatatcaaagattccatcgccgagctgcatcattaccgcaaaacgttcata
aaagcttaa

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