Simiduia agarivorans: M5M_17820
Help
Entry
M5M_17820 CDS
T02281
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
saga
Simiduia agarivorans
Pathway
saga00470
D-Amino acid metabolism
saga00550
Peptidoglycan biosynthesis
saga01100
Metabolic pathways
saga01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M5M_17820
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M5M_17820
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
M5M_17820
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
saga01011
]
M5M_17820
Enzymes [BR:
saga01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
M5M_17820
Peptidoglycan biosynthesis and degradation proteins [BR:
saga01011
]
Precursor biosynthesis
Amino acid ligase
M5M_17820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
CPSase_L_D2
ATP-grasp
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AFV00693
UniProt:
K4L3E1
LinkDB
All DBs
Position
3926624..3927574
Genome browser
AA seq
316 aa
AA seq
DB search
MLNVKDFRFDQQTLRAIGRVGVLLGGDSAEREVSLKSGTAIADALNSAGLDVVKIDTAKD
AIGLIQQAAIDVAFIALHGPGGEDGRMQALLDFMGIPYTGSGVQASAIAMDKWRTKQIWR
GESLSTPDYRIVNADSDLATILAELGGKVMVKPSHEGSSIGMSRVESLAEFKVALQTALS
LDATVIVERLIEGAEYTVAILGDEVLPPIKLEAANRFYDYDAKYISNATRYICPCGLNET
KEAELKALAMAGFKAIGCKGWGRVDVMADGAGNFYMLEVNTVPGMTDHSLVPMAAKQAGY
SFESLVCNILQDAIHA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacgtaaaagacttccgctttgaccaacaaacccttcgggctatcgggcgcgtg
ggcgtattgctcggcggtgattctgctgaacgcgaagtgagcctcaagtccggcacggcg
attgctgacgcattgaacagtgcgggtctggatgtggtgaaaattgatacggcgaaggat
gcgatcggtctaatccagcaggctgcgatcgatgtggcatttatcgctctgcatggtccg
ggcggtgaagatggacggatgcaggcgctattggattttatgggtattccctacaccggc
agtggtgtacaggcgtctgcaattgccatggataaatggcgcacgaagcagatttggcgt
ggcgagagtttgtcgacacccgactaccggatagtgaatgcagattcggatctggcgaca
atactggcagaactgggcggcaaagtgatggtaaagcccagccatgaaggctcttccatt
ggcatgtcgcgggtcgagtcgttggctgaatttaaggtcgcgctgcaaacggcgctgtcg
ctggatgccacagtcattgtcgaacggttaatagagggtgctgaatataccgtggccatt
ttaggcgacgaagtattgccgccgatcaaactggaggccgccaaccgcttttacgattac
gacgcaaaatatatatctaacgcaacgcgctatatctgcccctgtggcctgaatgaaacc
aaagaagccgagcttaaagcgctcgcaatggcaggctttaaggcgattggctgcaaaggc
tgggggcgggtcgatgtgatggccgatggcgccggcaatttctatatgttggaagtgaat
acggtgcccggcatgacagaccactcgttggtaccgatggcggcgaagcaggcgggctac
agttttgaaagtctggtgtgcaacatattgcaggatgcgattcacgcatga
DBGET
integrated database retrieval system