Streptococcus agalactiae ILRI005: MSA_16120
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Entry
MSA_16120 CDS
T02704
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sagi
Streptococcus agalactiae ILRI005
Pathway
sagi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sagi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSA_16120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagi03400
]
MSA_16120
Enzymes [BR:
sagi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MSA_16120
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MSA_16120
DNA repair and recombination proteins [BR:
sagi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSA_16120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
KTSC
OrfB_Zn_ribbon
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
CCW40468
LinkDB
All DBs
Position
complement(1500292..1501107)
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETVRKGLERLVVNQEIASITIKVPKMVKTDLNDFMISLPGKTIQQVLRRGKYL
LFDFGEMVMVSHLRMEGKYLLFPNKVPDNKHFHLYFKLTNGSTLVYQDVRKFGTFELVRK
SSLKDYFTQKKLGPEPTADTFQFEPFSKGLANSKKPIKPLLLDQRLVAGLGNIYVDEVLW
AAKIHPQRLANQLTESETSLLHKEIIRILTLGTEKGGSTIRTYKNALGEDGTMQKYLQVY
GKTGQPCPRCGCLIKKIKVGGRGSHYCPRCQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtagaaaccgttagaaaaggactagaaagacttgtagttaat
caagaaatagcttctataacgattaaagtccctaaaatggtgaaaactgatttgaatgac
ttcatgataagtctaccaggaaaaacaattcaacaggtattgagacgagggaagtatctt
ctttttgactttggtgaaatggttatggtatcacatttacgcatggaaggaaagtatcta
ctcttcccaaataaagtaccagataacaaacattttcacctttatttcaaattgactaat
ggtagcacattggtttaccaagatgtccgtaaatttgggacatttgagttggttcgtaaa
tcatctctcaaagattattttactcaaaaaaaattaggtcctgagccaactgctgacaca
tttcaatttgagcctttttcaaaaggcttagcaaactccaaaaagccaataaaaccttta
ctattagatcagagattagtagcaggacttggaaatatttacgtagatgaagtcttgtgg
gcagcaaaaattcacccacagcgtttggctaatcaattgaccgaatctgaaactagctta
ttacacaaggaaattattcgcattttaactttaggtaccgaaaaaggtggctccacgatt
agaacatataagaatgctcttggagaggacggtacgatgcaaaagtatttacaggtctat
ggtaaaactgggcaaccgtgtccaaggtgtggttgtttaattaagaagataaaagtagga
gggagagggtcgcattattgccctcggtgtcaatga
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