KEGG   Sagittula sp. P11: CDO87_10465
Entry
CDO87_10465       CDS       T05219                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
sagu  Sagittula sp. P11
Pathway
sagu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sagu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CDO87_10465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sagu03400]
    CDO87_10465
Enzymes [BR:sagu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CDO87_10465
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CDO87_10465
DNA repair and recombination proteins [BR:sagu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CDO87_10465
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS zinc-ribbons_6
Other DBs
NCBI-ProteinID: AUC53588
LinkDB
Position
2140845..2141696
AA seq 283 aa
MPELPEVETVRRGLAPVMEGQVIARAQVNRPDLRWPFPERMAERLTGARVLQLRRRSKYI
LADLSTDETLLIHLGMSGRMLVSGDPLGQFVHAHPMPEKHDHVVFDMENGARVTFNDPRR
FGAMDLMPTQAAEAHPLLARIGPEPLSNAFTESHLVERLKGRNMPVKSALLDQKIVAGLG
NIYVCEALFRGGIHPARRCVRISAARISALVPIVRDVLDDAIAAGGSSLRDFRQADGELG
YFQHSFDVYGREGEPCRAPGCTSKIQRIVQSGRSSFFCPTCQR
NT seq 852 nt   +upstreamnt  +downstreamnt
atgcccgaactgcccgaagtcgaaaccgtgcgccgcggtctggcccccgtcatggaaggc
caggtcatcgcgcgcgcacaggtcaaccggcccgacctccgctggccttttccagaacgg
atggccgaacggctgaccggggcgcgtgtcttgcagcttcgccggcggtcaaagtacatc
ctcgccgacctgtccacggacgaaaccctgctgatccacctcggtatgtccggacggatg
ctggtgtcgggcgatcccctcggccagttcgtgcacgcgcatcccatgccggagaaacac
gatcacgtcgtcttcgacatggagaacggcgcccgcgtcacgttcaacgatccgcgtcgc
ttcggcgccatggacctgatgcccacgcaggcggccgaggcgcacccgctgctcgcccgg
atcggtccggaaccgctgagcaatgccttcaccgaatcccacctcgtggagcgactcaag
gggcggaacatgccggtcaaatccgcgcttctggaccagaagatcgtcgccggactgggc
aacatatacgtttgtgaagcgctgttccgtggcggcatccatccggcgcgacgttgtgtc
cgcatctccgcggcgcggatttcggcgctggttcccatcgtccgcgacgtgctggacgac
gccatcgcggcgggcggatcatctctccgggatttccggcaagccgatggagaacttgga
tatttccagcacagctttgacgtctacggacgtgagggtgagccatgcagggcgcccggt
tgcaccagtaagatccagcgtatcgtgcagtcggggcggtcgtccttcttctgcccgacc
tgccaaagataa

DBGET integrated database retrieval system